RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MBD3L4A6NDZ8 208 aaPredicted RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 MBD3L3A6NE82 208 aaPredicted RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 MBD3L5A6NJ08 208 aaPredicted RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 J3QW42 95 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 SAA2P0DJI9 122 aaPredicted RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 PRRX1P54821 245 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 ERASQ7Z444 233 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 MBD3L2Q8NHZ7 208 aaPredicted RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 RNASE8Q8TDE3 154 aaKnown RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 TECRQ9NZ01 308 aaKnown RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 IDI2-AS1Q9NZ38 188 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 PROCRQ9UNN8 238 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 FLNCQ14315 2725 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 A0A1W2PN81 502 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 FAM90A9PA6NNJ1 464 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 AMY1AP04745 511 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 CECR9P0C854 216 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 HSPE1P61604 102 aaKnown RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 RAB31Q13636 194 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 GUSBP1Q15486 140 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 MSMPQ1L6U9 139 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 CT45A1Q5HYN5 189 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 GDF5OSQ5U4N7 250 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 CT45A3Q8NHU0 189 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 SSBP4Q9BWG4 385 aaPredicted RBP11.68□□□□□ -0.54
MSH5-206ENST00000423982 PLEKHA3Q9HB20 300 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 MYO18BQ8IUG5 2567 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 APCSP02743 223 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
MSH5-206ENST00000423982 TNXAQ16473 311 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 KIR3DL3Q8N743 410 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 ZNF439Q8NDP4 499 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 NEUROG1Q92886 237 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 JPT1Q9UK76 154 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 NAV3Q8IVL0 2385 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 GNG10P50151 68 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 ENY2Q9NPA8 101 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 ZNF355PQ9NSJ1 428 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 TMEM14BQ9NUH8 114 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 HIVEP3Q5T1R4 2406 aa11.67□□□□□ -0.54
MSH5-206ENST00000423982 A0A0G2JNJ9 132 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 IGHV3-48P01763 117 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 MT-ND6P03923 174 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 Q56UQ5 140 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 Q6ZT83 130 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 SPATA12Q7Z6I5 190 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 LYG1Q8N1E2 194 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 OR4S2Q8NH73 311 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 SGK494Q96LW2 274 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 IGF2BP2-AS1Q96M15 143 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 SLC35D1Q9NTN3 355 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 Q9UFV3 132 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 OR51B2Q9Y5P1 312 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 SMIM27A0A1W2PRY6 76 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 IGKV1-16P04430 117 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 CD24P25063 80 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 OR10W1Q8NGF6 305 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 CALYQ9NYX4 217 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 LRBAP50851 2863 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 PLXNB1O43157 2135 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 TMEM8BA6NDV4 472 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 ISLRO14498 428 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 IGKV3-15P01624 115 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 TSPOP30536 169 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 PTTG1IPP53801 180 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 RPL8P62917 257 aaKnown RBP11.66□□□□□ -0.54
MSH5-206ENST00000423982 SSBP2P81877 361 aaPredicted RBP11.66□□□□□ -0.54
MSH5-206ENST00000423982 PRR27Q6MZM9 219 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 EBLN2Q6P2I7 272 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 GCSAMQ8N6F7 178 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 ST6GALNAC6Q969X2 333 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 BORCS7Q96B45 105 aa11.66□□□□□ -0.54
MSH5-206ENST00000423982 ZNF462Q96JM2 2506 aa11.65□□□□□ -0.54
MSH5-206ENST00000423982 DSCAML1Q8TD84 2053 aa11.65□□□□□ -0.54
MSH5-206ENST00000423982 C20orf202A1L168 122 aa11.65□□□□□ -0.54
MSH5-206ENST00000423982 SH2D7A6NKC9 451 aaPredicted RBP11.65□□□□□ -0.54
MSH5-206ENST00000423982 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
MSH5-206ENST00000423982 PYYP10082 97 aa11.65□□□□□ -0.54
MSH5-206ENST00000423982 PMCHL1Q16048 86 aa11.65□□□□□ -0.54
MSH5-206ENST00000423982 ZNF474Q6S9Z5 364 aaPredicted RBP11.65□□□□□ -0.54
MSH5-206ENST00000423982 TMEM167BQ9NRX6 74 aa11.65□□□□□ -0.54
MSH5-206ENST00000423982 FOXA2Q9Y261 457 aaPredicted RBP11.65□□□□□ -0.54
MSH5-206ENST00000423982 J3QR06 171 aa11.65□□□□□ -0.55
MSH5-206ENST00000423982 HLA-DQA1P01909 254 aa11.65□□□□□ -0.55
MSH5-206ENST00000423982 PPOXP50336 477 aa11.65□□□□□ -0.55
MSH5-206ENST00000423982 MFAP2P55001 183 aa11.65□□□□□ -0.55
MSH5-206ENST00000423982 RBPJQ06330 500 aa11.65□□□□□ -0.55
MSH5-206ENST00000423982 FAM27E3Q08E93 113 aa11.65□□□□□ -0.55
MSH5-206ENST00000423982 SLC25A10Q9UBX3 287 aaPredicted RBP11.65□□□□□ -0.55
MSH5-206ENST00000423982 M0QZ24 198 aa11.64□□□□□ -0.55
MSH5-206ENST00000423982 CORTO00230 105 aa11.64□□□□□ -0.55
MSH5-206ENST00000423982 MMP23AO75900 390 aa11.64□□□□□ -0.55
MSH5-206ENST00000423982 CAMPP49913 170 aa11.64□□□□□ -0.55
MSH5-206ENST00000423982 C17orf58Q2M2W7 97 aa11.64□□□□□ -0.55
MSH5-206ENST00000423982 PLSCR4Q9NRQ2 329 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms