RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ZNF486Q96H40 463 aaPredicted RBP11.87□□□□□ -0.51
COL18A1-205ENST00000423214 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 TP53RKQ96S44 253 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 BCL7BQ9BQE9 202 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 PDCD10Q9BUL8 212 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 TMEM231Q9H6L2 316 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 C3orf85A0A1B0GTC6 90 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 DEDDO75618 318 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 IFNA4P05014 189 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
COL18A1-205ENST00000423214 FAM90A2PQ658T7 463 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 ZNF600Q6ZNG1 722 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 ZFAND1Q8TCF1 268 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 SMIM4Q8WVI0 70 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 ST8SIA2Q92186 375 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 SLIRPQ9GZT3 109 aaKnown RBP11.86□□□□□ -0.51
COL18A1-205ENST00000423214 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
COL18A1-205ENST00000423214 SCGB2A1O75556 95 aa11.85□□□□□ -0.51
COL18A1-205ENST00000423214 IFNA17P01571 189 aa11.85□□□□□ -0.51
COL18A1-205ENST00000423214 IGKV1-5P01602 117 aa11.85□□□□□ -0.51
COL18A1-205ENST00000423214 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
COL18A1-205ENST00000423214 NANOS2P60321 138 aaKnown RBP11.85□□□□□ -0.51
COL18A1-205ENST00000423214 MRPS10P82664 201 aaKnown RBP11.85□□□□□ -0.51
COL18A1-205ENST00000423214 SSBP1Q04837 148 aaKnown RBP11.85□□□□□ -0.51
COL18A1-205ENST00000423214 LGALS9CQ6DKI2 356 aa11.85□□□□□ -0.51
COL18A1-205ENST00000423214 TOMM20LQ6UXN7 152 aa11.85□□□□□ -0.51
COL18A1-205ENST00000423214 MS4A6AQ9H2W1 248 aa11.85□□□□□ -0.51
COL18A1-205ENST00000423214 PUS1Q9Y606 427 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL18A1-205ENST00000423214 IGHV3-66A0A0C4DH42 116 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 CORTO00230 105 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 CTDSPLO15194 276 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 DFFBO76075 338 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 ATG12O94817 140 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 TNFSF8P32971 234 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 DEFB131AP59861 70 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 TMEM187Q14656 261 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 TRIM16LQ309B1 348 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 LEMD1Q68G75 181 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 STHQ8IWL8 128 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 CCDC71LQ8N9Z2 235 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 OR4C16Q8NGL9 310 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 MCFD2Q8NI22 146 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 VSIRQ9H7M9 311 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 RABAC1Q9UI14 185 aa11.84□□□□□ -0.51
COL18A1-205ENST00000423214 CCDC160A6NGH7 325 aa11.83□□□□□ -0.52
COL18A1-205ENST00000423214 DISC1C4P0D8 188 aa11.83□□□□□ -0.52
COL18A1-205ENST00000423214 AKAIN1P0CW23 69 aa11.83□□□□□ -0.52
COL18A1-205ENST00000423214 SUB1P53999 127 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL18A1-205ENST00000423214 MEF2DQ14814 521 aa11.83□□□□□ -0.52
COL18A1-205ENST00000423214 RNASE11Q8TAA1 199 aaKnown RBP11.83□□□□□ -0.52
COL18A1-205ENST00000423214 NARS2Q96I59 477 aaKnown RBP11.83□□□□□ -0.52
COL18A1-205ENST00000423214 RTBDNQ9BSG5 229 aaPredicted RBP11.83□□□□□ -0.52
COL18A1-205ENST00000423214 ZFAND3Q9H8U3 227 aa11.83□□□□□ -0.52
COL18A1-205ENST00000423214 ENY2Q9NPA8 101 aa11.83□□□□□ -0.52
COL18A1-205ENST00000423214 TRAV2A0A0B4J234 112 aa11.82□□□□□ -0.52
COL18A1-205ENST00000423214 A0A0B4J293 547 aa11.82□□□□□ -0.52
COL18A1-205ENST00000423214 FABP12A6NFH5 140 aa11.82□□□□□ -0.52
COL18A1-205ENST00000423214 DEFB4AO15263 64 aa11.82□□□□□ -0.52
COL18A1-205ENST00000423214 APOHP02749 345 aaPredicted RBP11.82□□□□□ -0.52
COL18A1-205ENST00000423214 OPRK1P41145 380 aa11.82□□□□□ -0.52
COL18A1-205ENST00000423214 STXBP6Q8NFX7 210 aa11.82□□□□□ -0.52
COL18A1-205ENST00000423214 C2CD4CQ8TF44 421 aa11.82□□□□□ -0.52
COL18A1-205ENST00000423214 C14orf166Q9Y224 244 aaKnown RBP11.82□□□□□ -0.52
COL18A1-205ENST00000423214 A0A0G2JRQ6 117 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 A0A1W2PS18 150 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 ANKRD20A5PA0PJZ0 165 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 OR5AC1P0C628 307 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 P0C879 139 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 NPPCP23582 126 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 OR51S1Q8NGJ8 323 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 METTL26Q96S19 204 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 SOSTQ9BQB4 213 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 RABL2AQ9UBK7 228 aaPredicted RBP11.81□□□□□ -0.52
COL18A1-205ENST00000423214 RSL24D1Q9UHA3 163 aaKnown RBP11.81□□□□□ -0.52
COL18A1-205ENST00000423214 RABL2BQ9UNT1 228 aa11.81□□□□□ -0.52
COL18A1-205ENST00000423214 TEX13DA0A0J9YY54 714 aaPredicted RBP11.8□□□□□ -0.52
COL18A1-205ENST00000423214 A0A1B0GU03 582 aa11.8□□□□□ -0.52
COL18A1-205ENST00000423214 INS-IGF2F8WCM5 200 aa11.8□□□□□ -0.52
COL18A1-205ENST00000423214 GSTZ1O43708 216 aaPredicted RBP11.8□□□□□ -0.52
COL18A1-205ENST00000423214 TMEM50AO95807 157 aa11.8□□□□□ -0.52
COL18A1-205ENST00000423214 RNASE2P10153 161 aaKnown RBP11.8□□□□□ -0.52
COL18A1-205ENST00000423214 UCP1P25874 307 aa11.8□□□□□ -0.52
COL18A1-205ENST00000423214 ETV6P41212 452 aa11.8□□□□□ -0.52
COL18A1-205ENST00000423214 FAM24BQ8N5W8 94 aa11.8□□□□□ -0.52
COL18A1-205ENST00000423214 RRNAD1Q96FB5 475 aaKnown RBP11.8□□□□□ -0.52
COL18A1-205ENST00000423214 GPR132Q9UNW8 380 aa11.8□□□□□ -0.52
COL18A1-205ENST00000423214 DNAH6Q9C0G6 4158 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 TCTAP57738 103 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 TMEM41BQ5BJD5 291 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 Q6ZRM9 215 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 CENPSQ8N2Z9 138 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 LILRB2Q8N423 598 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 LHFPL5Q8TAF8 219 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 GLYATL2Q8WU03 294 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 TMEM230Q96A57 120 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 PRRT1Q99946 306 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 TMEM222Q9H0R3 208 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 NAA60Q9H7X0 242 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 MCUBQ9NWR8 336 aa11.79□□□□□ -0.52
COL18A1-205ENST00000423214 DNAH10Q8IVF4 4471 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms