RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 GLYATL2Q8WU03 294 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 ZNF414Q96IQ9 312 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 SCP2D1Q9UJQ7 156 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 RNASE2P10153 161 aaKnown RBP18.79■□□□□ 0.6
VEGFA-208ENST00000417285 PVRIGQ6DKI7 326 aa18.79■□□□□ 0.6
VEGFA-208ENST00000417285 MCFD2Q8NI22 146 aa18.79■□□□□ 0.6
VEGFA-208ENST00000417285 GALNT14Q96FL9 552 aa18.79■□□□□ 0.6
VEGFA-208ENST00000417285 RNF2Q99496 336 aa18.79■□□□□ 0.6
VEGFA-208ENST00000417285 GINS3Q9BRX5 216 aa18.79■□□□□ 0.6
VEGFA-208ENST00000417285 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.79■□□□□ 0.6
VEGFA-208ENST00000417285 FABP12A6NFH5 140 aa18.78■□□□□ 0.6
VEGFA-208ENST00000417285 TNFSF8P32971 234 aa18.78■□□□□ 0.6
VEGFA-208ENST00000417285 SPCS3P61009 180 aa18.78■□□□□ 0.6
VEGFA-208ENST00000417285 Q6ZRM9 215 aa18.78■□□□□ 0.6
VEGFA-208ENST00000417285 SELENOHQ8IZQ5 122 aaKnown RBP18.78■□□□□ 0.6
VEGFA-208ENST00000417285 OR52E5Q8NH55 327 aa18.78■□□□□ 0.6
VEGFA-208ENST00000417285 LHFPL5Q8TAF8 219 aa18.78■□□□□ 0.6
VEGFA-208ENST00000417285 SCGB3A2Q96PL1 93 aa18.78■□□□□ 0.6
VEGFA-208ENST00000417285 DNAH1Q9P2D7 4330 aa18.78■□□□□ 0.6
VEGFA-208ENST00000417285 AARDQ4LEZ3 155 aa18.77■□□□□ 0.6
VEGFA-208ENST00000417285 TMEM268Q5VZI3 342 aa18.77■□□□□ 0.6
VEGFA-208ENST00000417285 MCUBQ9NWR8 336 aa18.77■□□□□ 0.6
VEGFA-208ENST00000417285 PAFAH1B2P68402 229 aa18.76■□□□□ 0.59
VEGFA-208ENST00000417285 TNFRSF9Q07011 255 aa18.76■□□□□ 0.59
VEGFA-208ENST00000417285 ZNF600Q6ZNG1 722 aa18.76■□□□□ 0.59
VEGFA-208ENST00000417285 SOSTQ9BQB4 213 aa18.76■□□□□ 0.59
VEGFA-208ENST00000417285 KCNIP3Q9Y2W7 256 aa18.76■□□□□ 0.59
VEGFA-208ENST00000417285 IGHV3-49A0A0A0MS15 119 aa18.75■□□□□ 0.59
VEGFA-208ENST00000417285 SCGB2A1O75556 95 aa18.75■□□□□ 0.59
VEGFA-208ENST00000417285 OPRK1P41145 380 aa18.75■□□□□ 0.59
VEGFA-208ENST00000417285 TOMM20LQ6UXN7 152 aa18.75■□□□□ 0.59
VEGFA-208ENST00000417285 RNF183Q96D59 192 aa18.75■□□□□ 0.59
VEGFA-208ENST00000417285 CACNG5Q9UF02 275 aa18.75■□□□□ 0.59
VEGFA-208ENST00000417285 TMEM56-RWDD3S4R434 201 aa18.75■□□□□ 0.59
VEGFA-208ENST00000417285 TMEM50AO95807 157 aa18.74■□□□□ 0.59
VEGFA-208ENST00000417285 HTR2BP41595 481 aa18.74■□□□□ 0.59
VEGFA-208ENST00000417285 BSXQ3C1V8 233 aa18.74■□□□□ 0.59
VEGFA-208ENST00000417285 FAM90A2PQ658T7 463 aa18.74■□□□□ 0.59
VEGFA-208ENST00000417285 IL22RA2Q969J5 263 aa18.74■□□□□ 0.59
VEGFA-208ENST00000417285 GPR146Q96CH1 333 aa18.74■□□□□ 0.59
VEGFA-208ENST00000417285 MAP6D1Q9H9H5 199 aa18.74■□□□□ 0.59
VEGFA-208ENST00000417285 CACFD1Q9UGQ2 172 aa18.74■□□□□ 0.59
VEGFA-208ENST00000417285 PUS1Q9Y606 427 aaKnown RBP eCLIP18.74■□□□□ 0.59
VEGFA-208ENST00000417285 ATF4P18848 351 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-208ENST00000417285 DEFB135Q30KP9 77 aa18.73■□□□□ 0.59
VEGFA-208ENST00000417285 HEYLQ9NQ87 328 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-208ENST00000417285 A0A0J9YWU9 116 aa18.72■□□□□ 0.59
VEGFA-208ENST00000417285 RPS10-NUDT3A0A1W2PQS6 291 aa18.72■□□□□ 0.59
VEGFA-208ENST00000417285 CCDC160A6NGH7 325 aa18.72■□□□□ 0.59
VEGFA-208ENST00000417285 CLN5O75503 358 aa18.72■□□□□ 0.59
VEGFA-208ENST00000417285 RPL35AP18077 110 aaKnown RBP18.72■□□□□ 0.59
VEGFA-208ENST00000417285 FAUP35544 74 aaKnown RBP18.72■□□□□ 0.59
VEGFA-208ENST00000417285 LYG2Q86SG7 212 aa18.72■□□□□ 0.59
VEGFA-208ENST00000417285 OR4X1Q8NH49 305 aa18.72■□□□□ 0.59
VEGFA-208ENST00000417285 FNDC4Q9H6D8 234 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-208ENST00000417285 VSIRQ9H7M9 311 aa18.72■□□□□ 0.59
VEGFA-208ENST00000417285 IGHV3OR16-13A0A075B7E8 117 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 IGHV3-74A0A0B4J1X5 117 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 CEBPZOSA8MTT3 80 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 TMEM187Q14656 261 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 TCF24Q7RTU0 167 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 APRG1Q8IVJ8 170 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 TMEM217Q8N7C4 229 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 TMEM230Q96A57 120 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 CSTL1Q9H114 145 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 ZFAND3Q9H8U3 227 aa18.71■□□□□ 0.59
VEGFA-208ENST00000417285 IGKV3-7A0A075B6H7 116 aa18.7■□□□□ 0.58
VEGFA-208ENST00000417285 SULT1A3P0DMM9 295 aa18.7■□□□□ 0.58
VEGFA-208ENST00000417285 SULT1A4P0DMN0 295 aa18.7■□□□□ 0.58
VEGFA-208ENST00000417285 TFPI2P48307 235 aa18.7■□□□□ 0.58
VEGFA-208ENST00000417285 AP3S2P59780 193 aa18.7■□□□□ 0.58
VEGFA-208ENST00000417285 PYDC2Q56P42 97 aa18.7■□□□□ 0.58
VEGFA-208ENST00000417285 TMEM231Q9H6L2 316 aa18.7■□□□□ 0.58
VEGFA-208ENST00000417285 CXorf65A6NEN9 183 aa18.69■□□□□ 0.58
VEGFA-208ENST00000417285 MPTX1A8MV57 137 aa18.69■□□□□ 0.58
VEGFA-208ENST00000417285 ANXA3P12429 323 aa18.69■□□□□ 0.58
VEGFA-208ENST00000417285 AKR1C4P17516 323 aa18.69■□□□□ 0.58
VEGFA-208ENST00000417285 C2orf83Q53S99 150 aa18.69■□□□□ 0.58
VEGFA-208ENST00000417285 GBGT1Q8N5D6 347 aa18.69■□□□□ 0.58
VEGFA-208ENST00000417285 SLC24A4Q8NFF2 622 aa18.69■□□□□ 0.58
VEGFA-208ENST00000417285 ST8SIA2Q92186 375 aa18.69■□□□□ 0.58
VEGFA-208ENST00000417285 MRPL36Q9P0J6 103 aaKnown RBP18.69■□□□□ 0.58
VEGFA-208ENST00000417285 TRAV30A0A087WSZ9 112 aa18.68■□□□□ 0.58
VEGFA-208ENST00000417285 TRAV2A0A0B4J234 112 aa18.68■□□□□ 0.58
VEGFA-208ENST00000417285 A0A1B0GU03 582 aa18.68■□□□□ 0.58
VEGFA-208ENST00000417285 A0A1W2PS18 150 aa18.68■□□□□ 0.58
VEGFA-208ENST00000417285 DNASE2O00115 360 aaPredicted RBP18.68■□□□□ 0.58
VEGFA-208ENST00000417285 NPPCP23582 126 aa18.68■□□□□ 0.58
VEGFA-208ENST00000417285 S100A5P33763 92 aa18.68■□□□□ 0.58
VEGFA-208ENST00000417285 MLANAQ16655 118 aa18.68■□□□□ 0.58
VEGFA-208ENST00000417285 RNASEH2CQ8TDP1 164 aaKnown RBP18.68■□□□□ 0.58
VEGFA-208ENST00000417285 A0A0B4J2A0 478 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 NUPR2A6NF83 97 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 DFFBO76075 338 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 SRPXP78539 464 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 KLF9Q13886 244 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-208ENST00000417285 NOXA1Q86UR1 476 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 TOMM5Q8N4H5 51 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 GATAD1Q8WUU5 269 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 METTL26Q96S19 204 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms