RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 RNASE12Q5GAN4 147 aaKnown RBP10.78□□□□□ -0.68
RPS28-201ENST00000417088 STHQ8IWL8 128 aa10.78□□□□□ -0.68
RPS28-201ENST00000417088 KLK11Q9UBX7 282 aa10.78□□□□□ -0.68
RPS28-201ENST00000417088 AGRNO00468 2067 aa10.78□□□□□ -0.68
RPS28-201ENST00000417088 HECTD4Q9Y4D8 3996 aa10.77□□□□□ -0.68
RPS28-201ENST00000417088 A0A0G2JRQ6 117 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 C3orf85A0A1B0GTC6 90 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 A0A1W2PS18 150 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 K7EQG2 157 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 CLN5O75503 358 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 ATG12O94817 140 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 CD3DP04234 171 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 RBMY1A1P0DJD3 496 aaKnown RBP10.77□□□□□ -0.69
RPS28-201ENST00000417088 RBMY1CP0DJD4 496 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 CRYBB3P26998 211 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 PPP5CP53041 499 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 SUB1P53999 127 aaKnown RBP eCLIP10.77□□□□□ -0.69
RPS28-201ENST00000417088 RBMY1FQ15415 496 aaKnown RBP10.77□□□□□ -0.69
RPS28-201ENST00000417088 SP6Q3SY56 376 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 RNASE10Q5GAN6 216 aaKnown RBP10.77□□□□□ -0.69
RPS28-201ENST00000417088 TRPT1Q86TN4 253 aaKnown RBP10.77□□□□□ -0.69
RPS28-201ENST00000417088 STXBP6Q8NFX7 210 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 OR4X1Q8NH49 305 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 PDCD10Q9BUL8 212 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 FUNDC2Q9BWH2 189 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 HRH4Q9H3N8 390 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 APLNQ9ULZ1 77 aa10.77□□□□□ -0.69
RPS28-201ENST00000417088 IGHV4-28A0A0C4DH34 117 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 IGLL5B9A064 214 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 RPL5P46777 297 aaKnown RBP10.76□□□□□ -0.69
RPS28-201ENST00000417088 P2RY1P47900 373 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 HOXA1P49639 335 aaPredicted RBP10.76□□□□□ -0.69
RPS28-201ENST00000417088 TRIM16LQ309B1 348 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 BSXQ3C1V8 233 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 ARRDC1Q8N5I2 433 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 OR52I2Q8NH67 350 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 GRAMD2BQ96HH9 432 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 METTL26Q96S19 204 aa10.76□□□□□ -0.69
RPS28-201ENST00000417088 KNCNA6PVL3 124 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 FAM25AB3EWG3 89 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 FAM25CB3EWG5 89 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 FAM25GB3EWG6 89 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 C11orf94C9JXX5 98 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 TNFAIP8O95379 198 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 IGKV1-17P01599 117 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 ZNF688P0C7X2 276 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 C4BPBP20851 252 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 UCP1P25874 307 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 OPRK1P41145 380 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
RPS28-201ENST00000417088 Q6ZRM9 215 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 TMEM230Q96A57 120 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 ENY2Q9NPA8 101 aa10.75□□□□□ -0.69
RPS28-201ENST00000417088 KIAA1109Q2LD37 5005 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 ZNF705EA8MWA4 302 aaPredicted RBP10.74□□□□□ -0.69
RPS28-201ENST00000417088 SPP1P10451 314 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 MIFP14174 115 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 HLA-DMBP28068 263 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 RORCP51449 518 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 TIGITQ495A1 244 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 TMEM41BQ5BJD5 291 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 OR4D10Q8NGI6 311 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 TERB2Q8NHR7 220 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 ZFAND1Q8TCF1 268 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 DCANP1Q8TF63 244 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 RRNAD1Q96FB5 475 aaKnown RBP10.74□□□□□ -0.69
RPS28-201ENST00000417088 COPZ2Q9P299 210 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 MTFP1Q9UDX5 166 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 X6R8D5 127 aa10.74□□□□□ -0.69
RPS28-201ENST00000417088 TBPP20226 339 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 AARDQ4LEZ3 155 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 ACTL10Q5JWF8 245 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 MZT2AQ6P582 158 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 CSNK1G2-AS1Q8NCQ2 148 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 OR13C8Q8NGS7 320 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 NARS2Q96I59 477 aaKnown RBP10.73□□□□□ -0.69
RPS28-201ENST00000417088 ABHD1Q96SE0 405 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 EXTL2Q9UBQ6 330 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 U3KQE9 123 aa10.73□□□□□ -0.69
RPS28-201ENST00000417088 TRAV30A0A087WSZ9 112 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 ELOA3CA0A087WX78 387 aaPredicted RBP10.72□□□□□ -0.69
RPS28-201ENST00000417088 SCGB2A1O75556 95 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 CD74P04233 296 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 HTR2BP41595 481 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 SPCS3P61009 180 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 DHRS2Q13268 280 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 SCGB2B2Q4G0G5 96 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 Q6ZTC4 211 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 RNASE11Q8TAA1 199 aaKnown RBP10.72□□□□□ -0.69
RPS28-201ENST00000417088 MARCH1Q8TCQ1 289 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 CLEC5AQ9NY25 188 aa10.72□□□□□ -0.69
RPS28-201ENST00000417088 TRAV10A0A0B4J240 114 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 RPS10-NUDT3A0A1W2PQS6 291 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 B3GALNT1O75752 331 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 CDS2O95674 445 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 RAB3DO95716 219 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 IGLC1P0CG04 106 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 PRSS54Q6PEW0 395 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 C16orf54Q6UWD8 224 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms