RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 H0YJW9 148 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 OVOL3O00110 214 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 TNFRSF13BO14836 293 aaPredicted RBP7.96□□□□□ -1.13
SS18-203ENST00000415083 PMCHP20382 165 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 CHRNB4P30926 498 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 PPOXP50336 477 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 MFAP2P55001 183 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 DLX1P56177 255 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 SUMO1P63165 101 aaKnown RBP7.96□□□□□ -1.13
SS18-203ENST00000415083 CD69Q07108 199 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 Q6ZVH6 145 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 OR5AU1Q8NGC0 362 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 C20orf144Q9BQM9 153 aa7.96□□□□□ -1.13
SS18-203ENST00000415083 TECRQ9NZ01 308 aaKnown RBP7.96□□□□□ -1.13
SS18-203ENST00000415083 CORTO00230 105 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 BRS3P32247 399 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 GNG4P50150 75 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 MMDQ15546 238 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 MIEN1Q9BRT3 115 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 SSBP3Q9BWW4 388 aaPredicted RBP7.96□□□□□ -1.14
SS18-203ENST00000415083 LPAR2Q9HBW0 351 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 SLC35D1Q9NTN3 355 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 BET1LQ9NYM9 111 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 CDC42EP3Q9UKI2 254 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 ARL2-SNX15V9GYD0 113 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 MYCNOSP40205 109 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 TNFAIP6P98066 277 aaPredicted RBP7.96□□□□□ -1.14
SS18-203ENST00000415083 MAJINQ3KP22 176 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 LYPD2Q6UXB3 125 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 LINC00322Q6ZN03 302 aaPredicted RBP7.96□□□□□ -1.14
SS18-203ENST00000415083 OR1L8Q8NGR8 309 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 PLEKHA3Q9HB20 300 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 IL19Q9UHD0 177 aa7.96□□□□□ -1.14
SS18-203ENST00000415083 CEP250Q9BV73 2442 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 C22orf46C9J442 243 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 C1orf174Q8IYL3 243 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 FAM19A2Q8N3H0 131 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 URB1-AS1Q96HZ7 61 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 WNT10AQ9GZT5 417 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 OSTCQ9NRP0 149 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 PRNDQ9UKY0 176 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 CNOT1A5YKK6 2376 aaKnown RBP7.95□□□□□ -1.14
SS18-203ENST00000415083 A0A1W2PN81 502 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 ISLRO14498 428 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 CCL8P80075 99 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 TMEM200BQ69YZ2 307 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 OR5AN1Q8NGI8 311 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 ST6GALNAC6Q969X2 333 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 NAT8BQ9UHF3 227 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 TTC28Q96AY4 2481 aa7.95□□□□□ -1.14
SS18-203ENST00000415083 OR7C2O60412 319 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 PAFAH1B2P68402 229 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 MRPL54Q6P161 138 aaKnown RBP7.94□□□□□ -1.14
SS18-203ENST00000415083 ZNF329Q86UD4 541 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 C11orf42Q8N5U0 333 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 SIGLECL1Q8N7X8 197 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 PPP1R35Q8TAP8 253 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 FXYD5Q96DB9 178 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 TBL2Q9Y4P3 447 aaKnown RBP7.94□□□□□ -1.14
SS18-203ENST00000415083 TCF21O43680 179 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 CD40P25942 277 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 MZT1Q08AG7 82 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 TMEM183BQ1AE95 376 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 RBMXL3Q8N7X1 1067 aaKnown RBP7.94□□□□□ -1.14
SS18-203ENST00000415083 SLC35E1Q96K37 410 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 CTSZQ9UBR2 303 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 DIRC3C9JPN6 131 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 THBDP07204 575 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 NTF3P20783 257 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 AMTP48728 403 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 DLX6P56179 175 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 GNG5P63218 68 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 PRB3Q04118 309 aaPredicted RBP7.94□□□□□ -1.14
SS18-203ENST00000415083 C3orf36Q3SXR2 165 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 KIR3DL3Q8N743 410 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 TSKUQ8WUA8 353 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 NRN1Q9NPD7 142 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 SERTAD4Q9NUC0 356 aa7.94□□□□□ -1.14
SS18-203ENST00000415083 A0A1W2PRE2 83 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 C8orf88P0DMB2 117 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 CEACAM8P31997 349 aaPredicted RBP7.93□□□□□ -1.14
SS18-203ENST00000415083 TMEM167BQ9NRX6 74 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 ZNF785A8K8V0 405 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 REG1AP05451 166 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 CD24P25063 80 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 SRIP30626 198 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 ADIPOQQ15848 244 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 TMEM177Q53S58 311 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 IBA57Q5T440 356 aaKnown RBP7.93□□□□□ -1.14
SS18-203ENST00000415083 LCN12Q6JVE5 192 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 SPACA3Q8IXA5 215 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 ADTRPQ96IZ2 230 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 SGK494Q96LW2 274 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 ZNF714Q96N38 554 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 TP73-AS1Q9UF72 201 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 DPRXA6NFQ7 191 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 SIAH2O43255 324 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 PLAUP00749 431 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 MGST1P10620 155 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms