RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TSPOP30536 169 aa14.37□□□□□ -0.11
SIN3A-203ENST00000394949 C10orf91Q5T1B1 145 aa14.37□□□□□ -0.11
SIN3A-203ENST00000394949 ZNF418Q8TF45 676 aaPredicted RBP14.37□□□□□ -0.11
SIN3A-203ENST00000394949 SCN8AQ9UQD0 1980 aa14.37□□□□□ -0.11
SIN3A-203ENST00000394949 MDC1Q14676 2089 aaKnown RBP14.37□□□□□ -0.11
SIN3A-203ENST00000394949 RAMP3O60896 148 aa14.37□□□□□ -0.11
SIN3A-203ENST00000394949 GATA2P23769 480 aaPredicted RBP14.37□□□□□ -0.11
SIN3A-203ENST00000394949 APOBEC3AP31941 199 aaPredicted RBP14.37□□□□□ -0.11
SIN3A-203ENST00000394949 TDGF1P3P51864 188 aa14.36□□□□□ -0.11
SIN3A-203ENST00000394949 CD69Q07108 199 aa14.36□□□□□ -0.11
SIN3A-203ENST00000394949 PDLIM4P50479 330 aa14.36□□□□□ -0.11
SIN3A-203ENST00000394949 UBE2V1Q13404 147 aa14.36□□□□□ -0.11
SIN3A-203ENST00000394949 FAM106AQ4KMX7 169 aa14.36□□□□□ -0.11
SIN3A-203ENST00000394949 TREML4Q6UXN2 200 aa14.36□□□□□ -0.11
SIN3A-203ENST00000394949 TMEM50AO95807 157 aa14.36□□□□□ -0.11
SIN3A-203ENST00000394949 TMEM256Q8N2U0 113 aa14.36□□□□□ -0.11
SIN3A-203ENST00000394949 NXT2Q9NPJ8 142 aaKnown RBP14.36□□□□□ -0.11
SIN3A-203ENST00000394949 FAM181BA6NEQ2 426 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 IGHV2-70P01814 119 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 PRCDQ00LT1 54 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 TMEM170BQ5T4T1 132 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 GGTLC1Q9BX51 225 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 MRPL27Q9P0M9 148 aaKnown RBP14.35□□□□□ -0.11
SIN3A-203ENST00000394949 ROS1P08922 2347 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 CECR9P0C854 216 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 FAM90A2PQ658T7 463 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 DEPPQ9NTK1 212 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 LINC00312Q9Y6C7 94 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 TCRBV4S1A1TA0A5B7 111 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 DUTP33316 252 aaKnown RBP14.35□□□□□ -0.11
SIN3A-203ENST00000394949 EEF1AKMT3Q96AZ1 226 aa14.35□□□□□ -0.11
SIN3A-203ENST00000394949 NHP2Q9NX24 153 aaKnown RBP14.35□□□□□ -0.11
SIN3A-203ENST00000394949 MORN2Q502X0 79 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 CRIPAKQ8N1N5 446 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 C10orf126Q8N4M7 172 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 NUDT11Q96G61 164 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 SLC25A2Q9BXI2 301 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 NBASA2RRP1 2371 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 CELA3AP09093 270 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 GCSAMLQ5JQS6 135 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 Q6ZS49 121 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 TMEM262E9PQX1 116 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 SAA1P0DJI8 122 aaPredicted RBP14.34□□□□□ -0.11
SIN3A-203ENST00000394949 OR5AN1Q8NGI8 311 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 C20orf144Q9BQM9 153 aa14.34□□□□□ -0.11
SIN3A-203ENST00000394949 DPM2O94777 84 aa14.33□□□□□ -0.11
SIN3A-203ENST00000394949 TSPAN13O95857 204 aa14.33□□□□□ -0.11
SIN3A-203ENST00000394949 GEMIN7Q9H840 131 aaKnown RBP14.33□□□□□ -0.11
SIN3A-203ENST00000394949 LOC102723996A0A087X1L8 192 aa14.33□□□□□ -0.12
SIN3A-203ENST00000394949 DCTN5Q9BTE1 182 aa14.33□□□□□ -0.12
SIN3A-203ENST00000394949 ATP5G2Q06055 141 aa14.33□□□□□ -0.12
SIN3A-203ENST00000394949 OR9G9P0C7N8 305 aa14.33□□□□□ -0.12
SIN3A-203ENST00000394949 LEPP41159 167 aa14.33□□□□□ -0.12
SIN3A-203ENST00000394949 ASIPP42127 132 aa14.33□□□□□ -0.12
SIN3A-203ENST00000394949 MRPL20Q9BYC9 149 aaKnown RBP14.33□□□□□ -0.12
SIN3A-203ENST00000394949 SMPXQ9UHP9 88 aa14.33□□□□□ -0.12
SIN3A-203ENST00000394949 GREB1Q4ZG55 1949 aa14.33□□□□□ -0.12
SIN3A-203ENST00000394949 SAA2-SAA4A0A096LPE2 208 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 TRBV6-6A0A0A6YYG2 114 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 SAA2P0DJI9 122 aaPredicted RBP14.32□□□□□ -0.12
SIN3A-203ENST00000394949 SPSB3Q6PJ21 355 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 BEX4Q9NWD9 120 aaPredicted RBP14.32□□□□□ -0.12
SIN3A-203ENST00000394949 FAM159AQ6UWV7 190 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 DDB2Q92466 427 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 ERVK11-1P61568 191 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 GNG5P63218 68 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 FAM27E3Q08E93 113 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 C9JQL5 133 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 TYMSP04818 313 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 PVRIGQ6DKI7 326 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 NABP1Q96AH0 204 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 BRWD3Q6RI45 1802 aa14.32□□□□□ -0.12
SIN3A-203ENST00000394949 IGHV2-5P01817 119 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 C3orf79P0CE67 100 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 SLC25A48Q6ZT89 311 aaKnown RBP14.31□□□□□ -0.12
SIN3A-203ENST00000394949 ASCL2Q99929 193 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 FABP5P3A8MUU1 101 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 H7C1H1 209 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 ZNF56Q15929 161 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 NUDT10Q8NFP7 164 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 LINC01560Q8TB33 94 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 FAM57AQ8TBR7 257 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 IFI27L1Q96BM0 104 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 C21orf62Q9NYP8 219 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 IGHV2OR16-5A0A0B4J2B6 119 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 NDUFS8O00217 210 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 DNAL4O96015 105 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 IGKV1-5P01602 117 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 CACNG7P62955 275 aa14.31□□□□□ -0.12
SIN3A-203ENST00000394949 APOMO95445 188 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 RIPPLY3P57055 190 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 SAMD5Q5TGI4 173 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 RTN4RL2Q86UN3 420 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 FOXA2Q9Y261 457 aaPredicted RBP14.3□□□□□ -0.12
SIN3A-203ENST00000394949 EREGO14944 169 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 CSRP1P21291 193 aaKnown RBP14.3□□□□□ -0.12
SIN3A-203ENST00000394949 SEMA5BQ9P283 1151 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 GPR179Q6PRD1 2367 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 IGKV1-27A0A075B6S5 117 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 HGFACQ04756 655 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms