RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 DIRC3C9JPN6 131 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 ORM2P19652 201 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 GRNP28799 593 aaKnown RBP11.16□□□□□ -0.62
CCDC142-202ENST00000393965 RANP62826 216 aaKnown RBP11.16□□□□□ -0.62
CCDC142-202ENST00000393965 RAB31Q13636 194 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 LEMD1Q68G75 181 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 DIRC2Q96SL1 478 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 TIMM9Q9Y5J7 89 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 A0A1W2PN81 502 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 E7EUB6 86 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 LYNX1G3V0Z9 82 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 LYNX1P0DP58 116 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 CHRNB4P30926 498 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 TEPPQ6URK8 271 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 J3QR06 171 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 PDE6DO43924 150 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 GNG5P63218 68 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 TIGITQ495A1 244 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 HCP5Q6MZN7 132 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 RNASEKQ6P5S7 137 aaKnown RBP11.16□□□□□ -0.62
CCDC142-202ENST00000393965 PMCHL2Q9BQD1 86 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 GNB4Q9HAV0 340 aa11.16□□□□□ -0.62
CCDC142-202ENST00000393965 TBL2Q9Y4P3 447 aaKnown RBP11.16□□□□□ -0.62
CCDC142-202ENST00000393965 GGCTO75223 188 aaKnown RBP11.15□□□□□ -0.62
CCDC142-202ENST00000393965 CXorf1O96002 111 aa11.15□□□□□ -0.62
CCDC142-202ENST00000393965 CSN3P07498 182 aa11.15□□□□□ -0.62
CCDC142-202ENST00000393965 SRP14P37108 136 aaKnown RBP11.15□□□□□ -0.62
CCDC142-202ENST00000393965 TMEM108Q6UXF1 575 aa11.15□□□□□ -0.62
CCDC142-202ENST00000393965 Q6ZN92 141 aa11.15□□□□□ -0.62
CCDC142-202ENST00000393965 C1orf174Q8IYL3 243 aa11.15□□□□□ -0.62
CCDC142-202ENST00000393965 NOL4LQ96MY1 436 aaPredicted RBP11.15□□□□□ -0.62
CCDC142-202ENST00000393965 SH2D7A6NKC9 451 aaPredicted RBP11.15□□□□□ -0.62
CCDC142-202ENST00000393965 C17orf100A8MU93 164 aa11.15□□□□□ -0.62
CCDC142-202ENST00000393965 RPEL1Q2QD12 228 aa11.15□□□□□ -0.62
CCDC142-202ENST00000393965 CTSZQ9UBR2 303 aa11.15□□□□□ -0.62
CCDC142-202ENST00000393965 C15orf61A6NNL5 157 aa11.15□□□□□ -0.63
CCDC142-202ENST00000393965 SELENOVP59797 346 aa11.15□□□□□ -0.63
CCDC142-202ENST00000393965 MORN5Q5VZ52 161 aa11.15□□□□□ -0.63
CCDC142-202ENST00000393965 OR2D3Q8NGH3 330 aa11.15□□□□□ -0.63
CCDC142-202ENST00000393965 FAM168AQ92567 244 aa11.15□□□□□ -0.63
CCDC142-202ENST00000393965 TMEM68Q96MH6 324 aa11.15□□□□□ -0.63
CCDC142-202ENST00000393965 TMEM106BQ9NUM4 274 aa11.15□□□□□ -0.63
CCDC142-202ENST00000393965 RHOBP62745 196 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 NHLH1Q02575 133 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 CDSNQ15517 529 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 TCTEX1D1Q8N7M0 179 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 NABP2Q9BQ15 211 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 SLC25A10Q9UBX3 287 aaPredicted RBP11.14□□□□□ -0.63
CCDC142-202ENST00000393965 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 CELSR1Q9NYQ6 3014 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 MFAP2P55001 183 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 UBE2L3P68036 154 aaKnown RBP11.14□□□□□ -0.63
CCDC142-202ENST00000393965 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 OR4S2Q8NH73 311 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 MRPL20Q9BYC9 149 aaKnown RBP11.14□□□□□ -0.63
CCDC142-202ENST00000393965 GSX1Q9H4S2 264 aaPredicted RBP11.14□□□□□ -0.63
CCDC142-202ENST00000393965 RNF24Q9Y225 148 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 S4R3C0 116 aa11.14□□□□□ -0.63
CCDC142-202ENST00000393965 RITA1Q96K30 269 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 FBXL7Q9UJT9 491 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 FAM90A27PA6NNH2 459 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 SNAI2O43623 268 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 MOSP00540 346 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 OPRK1P41145 380 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 RPP30P78346 268 aaKnown RBP11.13□□□□□ -0.63
CCDC142-202ENST00000393965 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
CCDC142-202ENST00000393965 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 NUP37Q8NFH4 326 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 SAP30LQ9HAJ7 183 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 KCNIP2Q9NS61 270 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 RPUSD1Q9UJJ7 312 aaKnown RBP11.13□□□□□ -0.63
CCDC142-202ENST00000393965 ANKHD1Q8IWZ3 2542 aaKnown RBP11.13□□□□□ -0.63
CCDC142-202ENST00000393965 SPATA45Q537H7 98 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 TEX36Q5VZQ5 186 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 C11orf42Q8N5U0 333 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 TMEM14BQ9NUH8 114 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 ZNF586Q9NXT0 402 aa11.13□□□□□ -0.63
CCDC142-202ENST00000393965 IGKV1OR2-108A0A075B7D4 117 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 E7EQL1 145 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
CCDC142-202ENST00000393965 C3orf36Q3SXR2 165 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 SLC25A48Q6ZT89 311 aaKnown RBP11.12□□□□□ -0.63
CCDC142-202ENST00000393965 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
CCDC142-202ENST00000393965 C2orf88Q9BSF0 95 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 LINC01560Q8TB33 94 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 SLC35D1Q9NTN3 355 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 CREBBPQ92793 2442 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 SHISA9B4DS77 424 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 SAA1P0DJI8 122 aaPredicted RBP11.12□□□□□ -0.63
CCDC142-202ENST00000393965 USF1P22415 310 aaPredicted RBP11.12□□□□□ -0.63
CCDC142-202ENST00000393965 TNFSF4P23510 183 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 TP53TG3Q9ULZ0 132 aa11.12□□□□□ -0.63
CCDC142-202ENST00000393965 NOTCH3Q9UM47 2321 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms