RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 OPTNQ96CV9 577 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 NKIRAS1Q9NYS0 192 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 DMXL2Q8TDJ6 3036 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 PIK3R4Q99570 1358 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 NCOA6Q14686 2063 aaPredicted RBP0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 COL4A5P29400 1685 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 A0A087WX48 190 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 H0Y980 276 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 OR5F1O95221 314 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 DEXIO95424 95 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 TPM3P06753 285 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 EIF2B2P49770 351 aaKnown RBP0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 SUPT4H1P63272 117 aaKnown RBP0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 RUNX1Q01196 453 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 RPL22L1Q6P5R6 122 aaKnown RBP0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 GID4Q8IVV7 300 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 WFDC11Q8NEX6 87 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 TMEM106AQ96A25 262 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 CKLFQ9UBR5 152 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 C22orf24Q9Y442 160 aa0.57□□□□□ -2.32
RNU6-48P-201ENST00000384161 DOCK5Q9H7D0 1870 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 LAMA1P25391 3075 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 HTTP42858 3142 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 SPTA1P02549 2419 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 TOPBP1Q92547 1522 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 TRBV20OR9-2A0A075B6H5 130 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 NBPF19A0A087WUL8 3843 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 A0A0J9YY10 115 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 A0A1B0GX78 115 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 TMEM212A6NML5 194 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 GOLGA6L19H0YKK7 550 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 CETN3O15182 167 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 DCTN3O75935 186 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 CLPSP04118 112 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 ISG15P05161 165 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 OR5G3P0C626 314 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 MAGOHP61326 146 aaKnown RBP0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 ZNF846Q147U1 533 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 SPANXN3Q5MJ09 141 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 CD200R1LQ6Q8B3 271 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 Q6ZS49 121 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 ZNF826PQ6ZT77 177 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 IQCF2Q8IXL9 164 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 FAM19A2Q8N3H0 131 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 OR5B17Q8NGF7 314 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 AQP3Q92482 292 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 SCGB3A1Q96QR1 104 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 WDR61Q9GZS3 305 aaKnown RBP0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 LSM5Q9Y4Y9 91 aaKnown RBP0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 ATP6V1DQ9Y5K8 247 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 FAM186AA6NE01 2351 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 TTC21AQ8NDW8 1320 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 CENPEQ02224 2701 aa0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 TNRC6AQ8NDV7 1962 aaKnown RBP0.56□□□□□ -2.32
RNU6-48P-201ENST00000384161 RIC1Q4ADV7 1423 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 USH2AO75445 5202 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HTR1AP08908 422 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST1H2BOP23527 126 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 RPS12P25398 132 aaKnown RBP0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST1H2BBP33778 126 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST1H2BDP58876 126 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST1H2BCP62807 126 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 UBE2IP63279 158 aaKnown RBP0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 TPM4P67936 248 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST2H2BEQ16778 126 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 SPANXN5Q5MJ07 72 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 AADACL3Q5VUY0 350 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 LCN15Q6UWW0 184 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 PHF13Q86YI8 300 aaPredicted RBP0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 C10orf67Q8IYJ2 551 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 LRRC25Q8N386 305 aaPredicted RBP0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 MRPL30Q8TCC3 161 aaKnown RBP0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST1H2BHQ93079 126 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 LINC00526Q96FQ7 95 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST1H2BNQ99877 126 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST1H2BMQ99879 126 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 DERL1Q9BUN8 251 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 MIXL1Q9H2W2 232 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 OR51I1Q9H343 314 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 CHD9Q3L8U1 2897 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 EVC2Q86UK5 1308 aa0.55□□□□□ -2.32
RNU6-48P-201ENST00000384161 DENND4CQ5VZ89 1909 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 USP34Q70CQ2 3546 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 FREM2Q5SZK8 3169 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 EVPLLA8MZ36 301 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 INMT-MINDY4F8WBC2 141 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 COX6A1P12074 109 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 BRS3P32247 399 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 HIST3H3Q16695 136 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 GUK1Q16774 197 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 SFXN4Q6P4A7 337 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 C1orf158Q8N1D5 194 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 OR13C4Q8NGS5 318 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 PFN4Q8NHR9 129 aa0.54□□□□□ -2.32
RNU6-48P-201ENST00000384161 CISHQ9NSE2 258 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms