RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 SCGB3A1Q96QR1 104 aa17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 A0A1B0GWB2 263 aa17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 NXT2Q9NPJ8 142 aaKnown RBP17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 OR5AN1Q8NGI8 311 aa17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 KLHDC3Q9BQ90 382 aa17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 FBXL7Q9UJT9 491 aa17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 RNFT1Q5M7Z0 435 aa17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 CLEC2AQ6UVW9 174 aa17.59■□□□□ 0.41
TGFBR1-202ENST00000374994 FABP5P3A8MUU1 101 aa17.58■□□□□ 0.41
TGFBR1-202ENST00000374994 SRRM5B3KS81 715 aa17.58■□□□□ 0.41
TGFBR1-202ENST00000374994 H7C1H1 209 aa17.58■□□□□ 0.41
TGFBR1-202ENST00000374994 GNG5P63218 68 aa17.58■□□□□ 0.41
TGFBR1-202ENST00000374994 DDB2Q92466 427 aa17.58■□□□□ 0.41
TGFBR1-202ENST00000374994 SLC50A1Q9BRV3 221 aa17.58■□□□□ 0.41
TGFBR1-202ENST00000374994 H3BUT2 72 aa17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 SLC25A48Q6ZT89 311 aaKnown RBP17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 SNAI2O43623 268 aa17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 PYYP10082 97 aa17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 HGFACQ04756 655 aa17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 C9orf106Q8NAJ2 232 aa17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 ST6GALNAC3Q8NDV1 305 aa17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 TNFRSF14Q92956 283 aa17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 MRPL27Q9P0M9 148 aaKnown RBP17.58■□□□□ 0.4
TGFBR1-202ENST00000374994 ORAOV1Q8WV07 137 aa17.57■□□□□ 0.4
TGFBR1-202ENST00000374994 ARPC1AQ92747 370 aa17.57■□□□□ 0.4
TGFBR1-202ENST00000374994 WDR90Q96KV7 1748 aa17.57■□□□□ 0.4
TGFBR1-202ENST00000374994 FAM27E3Q08E93 113 aa17.57■□□□□ 0.4
TGFBR1-202ENST00000374994 CRXO43186 299 aaPredicted RBP17.57■□□□□ 0.4
TGFBR1-202ENST00000374994 FOXH1O75593 365 aa17.57■□□□□ 0.4
TGFBR1-202ENST00000374994 PSG8Q9UQ74 426 aa17.57■□□□□ 0.4
TGFBR1-202ENST00000374994 ZSWIM8A7E2V4 1837 aa17.57■□□□□ 0.4
TGFBR1-202ENST00000374994 SPTA1P02549 2419 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 PRSS8Q16651 343 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 RPUSD1Q9UJJ7 312 aaKnown RBP17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 OR9G4Q8NGQ1 327 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 TFPI2P48307 235 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 RNF144BQ7Z419 303 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 NUDT10Q8NFP7 164 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 RNF125Q96EQ8 232 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 NUDT11Q96G61 164 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 MRPS16Q9Y3D3 137 aaKnown RBP17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 HSD52Q0P140 79 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 RAX2Q96IS3 184 aa17.56■□□□□ 0.4
TGFBR1-202ENST00000374994 NTN3O00634 580 aaPredicted RBP17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 ZNF56Q15929 161 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 FAM57AQ8TBR7 257 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 SNRPD3P62318 126 aaKnown RBP17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 SAMD13Q5VXD3 122 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 ETV2O00321 342 aaPredicted RBP17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 SMPXQ9UHP9 88 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 DOCK6Q96HP0 2047 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 C8orf46Q8TAG6 207 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 KIF26BQ2KJY2 2108 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 TMEM133Q9H2Q1 129 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 FAM181BA6NEQ2 426 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 PPP1R27Q86WC6 154 aa17.55■□□□□ 0.4
TGFBR1-202ENST00000374994 FNDC10F2Z333 226 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 IGKV1D-33P01593 117 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 IGKV1-33P01594 117 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 PLAURQ03405 335 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 SCN2AQ99250 2005 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 NBR2O15453 112 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 TMEM170BQ5T4T1 132 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 MGST2Q99735 147 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 PAX1P15863 534 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 NEU4Q8WWR8 484 aaPredicted RBP17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 SLC25A2Q9BXI2 301 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 GEMIN7Q9H840 131 aaKnown RBP17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 C5orf63A6NC05 138 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 C9JQL5 133 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 SLX1AQ9BQ83 275 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 LEPP41159 167 aa17.54■□□□□ 0.4
TGFBR1-202ENST00000374994 GZMBP10144 247 aa17.53■□□□□ 0.4
TGFBR1-202ENST00000374994 TMEM256Q8N2U0 113 aa17.53■□□□□ 0.4
TGFBR1-202ENST00000374994 SBF1O95248 1867 aa17.53■□□□□ 0.4
TGFBR1-202ENST00000374994 MESP1Q9BRJ9 268 aa17.53■□□□□ 0.4
TGFBR1-202ENST00000374994 CCL3L1P16619 93 aa17.53■□□□□ 0.4
TGFBR1-202ENST00000374994 RSPO3Q9BXY4 272 aaPredicted RBP17.53■□□□□ 0.4
TGFBR1-202ENST00000374994 TDRD6O60522 2096 aaKnown RBP17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 SPOCK3Q9BQ16 436 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 PINLYPA6NC86 204 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 LINC01549A6NIU2 74 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 M0R381 172 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 DPM2O94777 84 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 Q6P435 159 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 ZNF664Q8N3J9 261 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 OR2K2Q8NGT1 345 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 PSPNO60542 156 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 DERL1Q9BUN8 251 aa17.52■□□□□ 0.4
TGFBR1-202ENST00000374994 BSPH1Q075Z2 132 aa17.52■□□□□ 0.39
TGFBR1-202ENST00000374994 TEX29Q8N6K0 151 aa17.52■□□□□ 0.39
TGFBR1-202ENST00000374994 SEPSECSQ9HD40 501 aaKnown RBP17.51■□□□□ 0.39
TGFBR1-202ENST00000374994 RFNGQ9Y644 331 aa17.51■□□□□ 0.39
TGFBR1-202ENST00000374994 UBE2L6O14933 153 aa17.51■□□□□ 0.39
TGFBR1-202ENST00000374994 C1orf147Q96MC9 270 aaPredicted RBP17.51■□□□□ 0.39
TGFBR1-202ENST00000374994 PIMREGQ9BSJ6 248 aa17.51■□□□□ 0.39
TGFBR1-202ENST00000374994 PLXNA3P51805 1871 aa17.51■□□□□ 0.39
TGFBR1-202ENST00000374994 FAM74A4Q5TZK3 123 aa17.51■□□□□ 0.39
TGFBR1-202ENST00000374994 IGHV1-18A0A0C4DH31 117 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms