RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 SMCO1Q147U7 214 aa17.98■□□□□ 0.47
PFDN2-201ENST00000368010 RBMS2Q15434 407 aaKnown RBP17.98■□□□□ 0.47
PFDN2-201ENST00000368010 CENPSQ8N2Z9 138 aa17.98■□□□□ 0.47
PFDN2-201ENST00000368010 SLC24A4Q8NFF2 622 aa17.98■□□□□ 0.47
PFDN2-201ENST00000368010 DUXBA0A1W2PPF3 345 aa17.97■□□□□ 0.47
PFDN2-201ENST00000368010 ZNF207O43670 478 aaKnown RBP17.97■□□□□ 0.47
PFDN2-201ENST00000368010 ANKRD55Q3KP44 614 aa17.97■□□□□ 0.47
PFDN2-201ENST00000368010 OR52B4Q8NGK2 314 aa17.97■□□□□ 0.47
PFDN2-201ENST00000368010 ZNF414Q96IQ9 312 aa17.97■□□□□ 0.47
PFDN2-201ENST00000368010 RCHY1Q96PM5 261 aa17.97■□□□□ 0.47
PFDN2-201ENST00000368010 HIPK2Q9H2X6 1198 aa17.97■□□□□ 0.47
PFDN2-201ENST00000368010 RPS10-NUDT3A0A1W2PQS6 291 aa17.96■□□□□ 0.47
PFDN2-201ENST00000368010 C2orf83Q53S99 150 aa17.96■□□□□ 0.47
PFDN2-201ENST00000368010 LAMTOR1Q6IAA8 161 aa17.96■□□□□ 0.47
PFDN2-201ENST00000368010 SDHCQ99643 169 aaPredicted RBP17.96■□□□□ 0.47
PFDN2-201ENST00000368010 FNDC4Q9H6D8 234 aaPredicted RBP17.96■□□□□ 0.47
PFDN2-201ENST00000368010 A0A1B0GU03 582 aa17.95■□□□□ 0.46
PFDN2-201ENST00000368010 OR11H12B2RN74 326 aa17.95■□□□□ 0.46
PFDN2-201ENST00000368010 SCGB2A1O75556 95 aa17.95■□□□□ 0.46
PFDN2-201ENST00000368010 TNFRSF9Q07011 255 aa17.95■□□□□ 0.46
PFDN2-201ENST00000368010 DEFB125Q8N687 156 aa17.95■□□□□ 0.46
PFDN2-201ENST00000368010 OR10C1Q96KK4 312 aa17.95■□□□□ 0.46
PFDN2-201ENST00000368010 TM2D3Q9BRN9 247 aa17.95■□□□□ 0.46
PFDN2-201ENST00000368010 HSPB7Q9UBY9 170 aa17.95■□□□□ 0.46
PFDN2-201ENST00000368010 LINC00854A0A1B0GVQ3 168 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 SFT2D2O95562 160 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 TMEM50AO95807 157 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 PPP1R1AQ13522 171 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 ZNF600Q6ZNG1 722 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 NOXA1Q86UR1 476 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 LRTM2Q8N967 370 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 OR4X1Q8NH49 305 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 OR1S1Q8NH92 325 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 RNASEH2CQ8TDP1 164 aaKnown RBP17.94■□□□□ 0.46
PFDN2-201ENST00000368010 SPAG8Q99932 426 aaPredicted RBP17.94■□□□□ 0.46
PFDN2-201ENST00000368010 GINS3Q9BRX5 216 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 WFDC10AQ9H1F0 79 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 SMPXQ9UHP9 88 aa17.94■□□□□ 0.46
PFDN2-201ENST00000368010 HUWE1Q7Z6Z7 4374 aaKnown RBP17.93■□□□□ 0.46
PFDN2-201ENST00000368010 IGHV7-4-1A0A0J9YVY3 117 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 CENPXA8MT69 81 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 TSPAN4O14817 238 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 CLN5O75503 358 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 NDUFB6O95139 128 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 IL7P13232 177 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 NPY1RP25929 384 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 MLANAQ16655 118 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 HAGHQ16775 308 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 TOMM20LQ6UXN7 152 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 SRD5A3Q9H8P0 318 aa17.93■□□□□ 0.46
PFDN2-201ENST00000368010 MRPL36Q9P0J6 103 aaKnown RBP17.93■□□□□ 0.46
PFDN2-201ENST00000368010 TRAV14DV4A0A0A6YYC5 116 aa17.92■□□□□ 0.46
PFDN2-201ENST00000368010 UBE2MP61081 183 aaKnown RBP17.92■□□□□ 0.46
PFDN2-201ENST00000368010 TMEM116Q8NCL8 245 aa17.92■□□□□ 0.46
PFDN2-201ENST00000368010 DTD1Q8TEA8 209 aa17.92■□□□□ 0.46
PFDN2-201ENST00000368010 C7orf50Q9BRJ6 194 aaKnown RBP17.92■□□□□ 0.46
PFDN2-201ENST00000368010 RHPN1-AS1Q9BWJ2 59 aa17.92■□□□□ 0.46
PFDN2-201ENST00000368010 PUS1Q9Y606 427 aaKnown RBP eCLIP17.92■□□□□ 0.46
PFDN2-201ENST00000368010 IFNA10P01566 189 aa17.91■□□□□ 0.46
PFDN2-201ENST00000368010 LINC00322Q6ZN03 302 aaPredicted RBP17.91■□□□□ 0.46
PFDN2-201ENST00000368010 SPATA25Q9BR10 227 aa17.91■□□□□ 0.46
PFDN2-201ENST00000368010 RBKSQ9H477 322 aa17.91■□□□□ 0.46
PFDN2-201ENST00000368010 TMED3Q9Y3Q3 217 aa17.91■□□□□ 0.46
PFDN2-201ENST00000368010 U3KQ87 197 aa17.91■□□□□ 0.46
PFDN2-201ENST00000368010 TRAV30A0A087WSZ9 112 aa17.9■□□□□ 0.46
PFDN2-201ENST00000368010 IGHV3-49A0A0A0MS15 119 aa17.9■□□□□ 0.46
PFDN2-201ENST00000368010 CHEK1O14757 476 aa17.9■□□□□ 0.46
PFDN2-201ENST00000368010 SLC25A4P12235 298 aa17.9■□□□□ 0.46
PFDN2-201ENST00000368010 TMEM170AQ8WVE7 144 aa17.9■□□□□ 0.46
PFDN2-201ENST00000368010 ZFAND3Q9H8U3 227 aa17.9■□□□□ 0.46
PFDN2-201ENST00000368010 SLC25A6P12236 298 aa17.89■□□□□ 0.45
PFDN2-201ENST00000368010 BMI1P35226 326 aa17.89■□□□□ 0.45
PFDN2-201ENST00000368010 ETFRF1Q6IPR1 90 aa17.89■□□□□ 0.45
PFDN2-201ENST00000368010 RNF2Q99496 336 aa17.89■□□□□ 0.45
PFDN2-201ENST00000368010 OR4C46A6NHA9 309 aa17.88■□□□□ 0.45
PFDN2-201ENST00000368010 PITX3O75364 302 aa17.88■□□□□ 0.45
PFDN2-201ENST00000368010 RND2P52198 227 aa17.88■□□□□ 0.45
PFDN2-201ENST00000368010 PRSS54Q6PEW0 395 aa17.88■□□□□ 0.45
PFDN2-201ENST00000368010 FLVCR2Q9UPI3 526 aa17.88■□□□□ 0.45
PFDN2-201ENST00000368010 C9orf170A2RU37 121 aa17.87■□□□□ 0.45
PFDN2-201ENST00000368010 RBMY1BA6NDE4 496 aaKnown RBP17.87■□□□□ 0.45
PFDN2-201ENST00000368010 RBMY1EA6NEQ0 496 aaKnown RBP17.87■□□□□ 0.45
PFDN2-201ENST00000368010 HOXB5P09067 269 aa17.87■□□□□ 0.45
PFDN2-201ENST00000368010 RBMY1DP0C7P1 496 aaKnown RBP17.87■□□□□ 0.45
PFDN2-201ENST00000368010 BTCP35070 178 aa17.87■□□□□ 0.45
PFDN2-201ENST00000368010 ATP5IP56385 69 aaPredicted RBP17.87■□□□□ 0.45
PFDN2-201ENST00000368010 STAB2Q8WWQ8 2551 aa17.86■□□□□ 0.45
PFDN2-201ENST00000368010 IGHV3OR16-13A0A075B7E8 117 aa17.86■□□□□ 0.45
PFDN2-201ENST00000368010 IGHV3-74A0A0B4J1X5 117 aa17.86■□□□□ 0.45
PFDN2-201ENST00000368010 FAM90A26D6RGX4 464 aa17.86■□□□□ 0.45
PFDN2-201ENST00000368010 IGKV1-17P01599 117 aa17.86■□□□□ 0.45
PFDN2-201ENST00000368010 IGLC1P0CG04 106 aa17.86■□□□□ 0.45
PFDN2-201ENST00000368010 TIGITQ495A1 244 aa17.86■□□□□ 0.45
PFDN2-201ENST00000368010 OR1S2Q8NGQ3 325 aa17.86■□□□□ 0.45
PFDN2-201ENST00000368010 IFNA4P05014 189 aa17.85■□□□□ 0.45
PFDN2-201ENST00000368010 COQ8AQ8NI60 647 aa17.85■□□□□ 0.45
PFDN2-201ENST00000368010 MED6O75586 246 aa17.84■□□□□ 0.45
PFDN2-201ENST00000368010 CD5P06127 495 aa17.84■□□□□ 0.45
PFDN2-201ENST00000368010 OR4E1P0C645 316 aa17.84■□□□□ 0.45
PFDN2-201ENST00000368010 OR10J1P30954 320 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms