RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MLANAQ16655 118 aa10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SELENOHQ8IZQ5 122 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SLC35G3Q8N808 338 aa10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RRNAD1Q96FB5 475 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 DIRAS2Q96HU8 199 aa10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 NAA60Q9H7X0 242 aa10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 IGHV3-49A0A0A0MS15 119 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 A0A1B0GU03 582 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CRYM-AS1A6NIL9 109 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 DISC1C4P0D8 188 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CORTO00230 105 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 YIF1AO95070 293 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SUB1P53999 127 aaKnown RBP eCLIP10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 APOC4P55056 127 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SPCS3P61009 180 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 DHODHQ02127 395 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 IL18Q14116 193 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 ZNF600Q6ZNG1 722 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 OR4X1Q8NH49 305 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RBPMSQ93062 196 aaKnown RBP10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 GPR146Q96CH1 333 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RNF183Q96D59 192 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 GALNT14Q96FL9 552 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 MAP6D1Q9H9H5 199 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 C14orf166Q9Y224 244 aaKnown RBP10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TMEM56-RWDD3S4R434 201 aa10.09□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CLN5O75503 358 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 EWSR1Q01844 656 aaKnown RBP eCLIP10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TNFRSF9Q07011 255 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 APRG1Q8IVJ8 170 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 OR51S1Q8NGJ8 323 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 ST8SIA2Q92186 375 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TMEM230Q96A57 120 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 PRRT1Q99946 306 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 PDCD10Q9BUL8 212 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 PUS1Q9Y606 427 aaKnown RBP eCLIP10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 BIRC6Q9NR09 4857 aa10.08□□□□□ -0.8
TNFRSF1A-202ENST00000366159 IGHV3OR16-13A0A075B7E8 117 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 IGHV3-74A0A0B4J1X5 117 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 H3BMQ9 156 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SPRY2O43597 315 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 IGKV1-17P01599 117 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 CD5P06127 495 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TNFSF8P32971 234 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 BMI1P35226 326 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 HOXA1P49639 335 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 CMC4P56277 68 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 ZNF124Q15973 351 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 DEFB135Q30KP9 77 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TMEM170AQ8WVE7 144 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 GINS3Q9BRX5 216 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 RSL24D1Q9UHA3 163 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 ATF4P18848 351 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 HTR2BP41595 481 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SUPT4H1P63272 117 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TMEM187Q14656 261 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 C2orf83Q53S99 150 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TMEM268Q5VZI3 342 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TCF24Q7RTU0 167 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 STPG3Q8N7X2 389 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 IL22RA2Q969J5 263 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 C6orf62Q9GZU0 229 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 CACNG5Q9UF02 275 aa10.07□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 A0A0J9YWU9 116 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 DFFBO76075 338 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 RPL35AP18077 110 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 CRYBB3P26998 211 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 OPRK1P41145 380 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TFPI2P48307 235 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 LYG2Q86SG7 212 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 GBGT1Q8N5D6 347 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 RNASE11Q8TAA1 199 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 MS4A6AQ9H2W1 248 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 ENY2Q9NPA8 101 aa10.06□□□□□ -0.8
TNFRSF1A-202ENST00000366159 IGKV3-7A0A075B6H7 116 aa10.05□□□□□ -0.8
TNFRSF1A-202ENST00000366159 FABP12A6NFH5 140 aa10.05□□□□□ -0.8
TNFRSF1A-202ENST00000366159 PAFAH1B2P68402 229 aa10.05□□□□□ -0.8
TNFRSF1A-202ENST00000366159 PRSS54Q6PEW0 395 aa10.05□□□□□ -0.8
TNFRSF1A-202ENST00000366159 RNASEH2CQ8TDP1 164 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-202ENST00000366159 CSTL1Q9H114 145 aa10.05□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SCP2D1Q9UJQ7 156 aa10.05□□□□□ -0.8
TNFRSF1A-202ENST00000366159 U3KQE9 123 aa10.05□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TRAV30A0A087WSZ9 112 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 IGLC1P0CG04 106 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 NPPCP23582 126 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TIGITQ495A1 244 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 FAM24BQ8N5W8 94 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 MCFD2Q8NI22 146 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 TRIM63Q969Q1 353 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 HEYLQ9NQ87 328 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 PRR13Q9NZ81 148 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 KCNIP3Q9Y2W7 256 aa10.04□□□□□ -0.8
TNFRSF1A-202ENST00000366159 A0A0B4J2A0 478 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 IGHV3-66A0A0C4DH42 116 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 JTBO76095 146 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms