RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 C3AR1Q16581 482 aa11.75□□□□□ -0.53
APP-205ENST00000358918 CHCHD1Q96BP2 118 aaKnown RBP11.75□□□□□ -0.53
APP-205ENST00000358918 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
APP-205ENST00000358918 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
APP-205ENST00000358918 JPT1Q9UK76 154 aa11.75□□□□□ -0.53
APP-205ENST00000358918 IGHV1-24A0A0C4DH33 117 aa11.75□□□□□ -0.53
APP-205ENST00000358918 HIGD1CA8MV81 97 aa11.75□□□□□ -0.53
APP-205ENST00000358918 TMEM238C9JI98 176 aa11.75□□□□□ -0.53
APP-205ENST00000358918 LEPROTL1O95214 131 aa11.75□□□□□ -0.53
APP-205ENST00000358918 HLA-DRB1P01911 266 aa11.75□□□□□ -0.53
APP-205ENST00000358918 HIST1H1EP10412 219 aaKnown RBP11.75□□□□□ -0.53
APP-205ENST00000358918 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
APP-205ENST00000358918 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
APP-205ENST00000358918 FTH1P19P0C7X4 201 aa11.74□□□□□ -0.53
APP-205ENST00000358918 C11orf53Q8IXP5 236 aa11.74□□□□□ -0.53
APP-205ENST00000358918 MEGF9Q9H1U4 602 aa11.74□□□□□ -0.53
APP-205ENST00000358918 AMMECR1Q9Y4X0 333 aaPredicted RBP11.74□□□□□ -0.53
APP-205ENST00000358918 OTOGLQ3ZCN5 2332 aa11.74□□□□□ -0.53
APP-205ENST00000358918 MED12LQ86YW9 2145 aa11.74□□□□□ -0.53
APP-205ENST00000358918 DNAJC13O75165 2243 aa11.74□□□□□ -0.53
APP-205ENST00000358918 SRSF6Q13247 344 aaKnown RBP11.74□□□□□ -0.53
APP-205ENST00000358918 SMIM21Q3B7S5 101 aa11.74□□□□□ -0.53
APP-205ENST00000358918 MDS2Q8NDY4 140 aa11.74□□□□□ -0.53
APP-205ENST00000358918 SPOCK3Q9BQ16 436 aa11.74□□□□□ -0.53
APP-205ENST00000358918 SLC25A33Q9BSK2 321 aa11.74□□□□□ -0.53
APP-205ENST00000358918 MRPL32Q9BYC8 188 aaKnown RBP11.74□□□□□ -0.53
APP-205ENST00000358918 CXXC4Q9H2H0 198 aa11.74□□□□□ -0.53
APP-205ENST00000358918 A0A1B0GXF2 115 aa11.73□□□□□ -0.53
APP-205ENST00000358918 HBBP68871 147 aa11.73□□□□□ -0.53
APP-205ENST00000358918 PET117Q6UWS5 81 aa11.73□□□□□ -0.53
APP-205ENST00000358918 LINC00173Q6ZV60 143 aa11.73□□□□□ -0.53
APP-205ENST00000358918 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
APP-205ENST00000358918 KLF13Q9Y2Y9 288 aaPredicted RBP11.73□□□□□ -0.53
APP-205ENST00000358918 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
APP-205ENST00000358918 CORTO00230 105 aa11.72□□□□□ -0.53
APP-205ENST00000358918 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
APP-205ENST00000358918 IGHV3-7P01780 117 aa11.72□□□□□ -0.53
APP-205ENST00000358918 MOB3BQ86TA1 216 aa11.72□□□□□ -0.53
APP-205ENST00000358918 IFI27L2Q9H2X8 130 aa11.72□□□□□ -0.53
APP-205ENST00000358918 OR51B2Q9Y5P1 312 aa11.72□□□□□ -0.53
APP-205ENST00000358918 IGKV1OR2-108A0A075B7D4 117 aa11.72□□□□□ -0.53
APP-205ENST00000358918 A0A087X0K7 114 aa11.72□□□□□ -0.53
APP-205ENST00000358918 KLRC4-KLRK1H3BQV0 150 aa11.72□□□□□ -0.53
APP-205ENST00000358918 PEX7O00628 323 aa11.72□□□□□ -0.53
APP-205ENST00000358918 MPV17P39210 176 aa11.72□□□□□ -0.53
APP-205ENST00000358918 WDR82Q6UXN9 313 aa11.72□□□□□ -0.53
APP-205ENST00000358918 ZNF841Q6ZN19 808 aa11.72□□□□□ -0.53
APP-205ENST00000358918 SSX8Q7RTT4 187 aa11.72□□□□□ -0.53
APP-205ENST00000358918 FAM90A1Q86YD7 464 aa11.72□□□□□ -0.53
APP-205ENST00000358918 DDB2Q92466 427 aa11.72□□□□□ -0.53
APP-205ENST00000358918 SLC25A2Q9BXI2 301 aa11.72□□□□□ -0.53
APP-205ENST00000358918 MAP1LC3CQ9BXW4 147 aa11.72□□□□□ -0.53
APP-205ENST00000358918 DEFB127Q9H1M4 99 aa11.72□□□□□ -0.53
APP-205ENST00000358918 IDI2-AS1Q9NZ38 188 aa11.72□□□□□ -0.53
APP-205ENST00000358918 FREM1Q5H8C1 2179 aa11.72□□□□□ -0.53
APP-205ENST00000358918 NKX2-8O15522 239 aa11.71□□□□□ -0.53
APP-205ENST00000358918 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
APP-205ENST00000358918 CD46P15529 392 aa11.71□□□□□ -0.53
APP-205ENST00000358918 GPR183P32249 361 aa11.71□□□□□ -0.53
APP-205ENST00000358918 FOXA3P55318 350 aaPredicted RBP11.71□□□□□ -0.53
APP-205ENST00000358918 OR5AL1P0C617 328 aa11.71□□□□□ -0.54
APP-205ENST00000358918 MYOD1P15172 320 aa11.71□□□□□ -0.54
APP-205ENST00000358918 TMEM11P17152 192 aa11.71□□□□□ -0.54
APP-205ENST00000358918 RIPPLY3P57055 190 aa11.71□□□□□ -0.54
APP-205ENST00000358918 CHTOPQ9Y3Y2 248 aaKnown RBP11.71□□□□□ -0.54
APP-205ENST00000358918 ASPMQ8IZT6 3477 aa11.71□□□□□ -0.54
APP-205ENST00000358918 TRAV5A0A0B4J249 113 aa11.7□□□□□ -0.54
APP-205ENST00000358918 C7orf71A4D174 169 aa11.7□□□□□ -0.54
APP-205ENST00000358918 GAGE10A6NGK3 116 aa11.7□□□□□ -0.54
APP-205ENST00000358918 LIPFP07098 398 aa11.7□□□□□ -0.54
APP-205ENST00000358918 ZNF329Q86UD4 541 aa11.7□□□□□ -0.54
APP-205ENST00000358918 CD177Q8N6Q3 437 aa11.7□□□□□ -0.54
APP-205ENST00000358918 KLF14Q8TD94 323 aaPredicted RBP11.7□□□□□ -0.54
APP-205ENST00000358918 FAM167A-AS1Q96KT0 104 aa11.7□□□□□ -0.54
APP-205ENST00000358918 PRNDQ9UKY0 176 aa11.7□□□□□ -0.54
APP-205ENST00000358918 URB1O60287 2271 aaKnown RBP11.7□□□□□ -0.54
APP-205ENST00000358918 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
APP-205ENST00000358918 ZNF134P52741 427 aa11.7□□□□□ -0.54
APP-205ENST00000358918 PRR31Q5SQ13 230 aa11.7□□□□□ -0.54
APP-205ENST00000358918 OR9G1Q8NH87 305 aa11.7□□□□□ -0.54
APP-205ENST00000358918 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
APP-205ENST00000358918 ZNF835Q9Y2P0 537 aa11.7□□□□□ -0.54
APP-205ENST00000358918 CIDEAO60543 219 aa11.69□□□□□ -0.54
APP-205ENST00000358918 SAP30O75446 220 aa11.69□□□□□ -0.54
APP-205ENST00000358918 PRDX2P32119 198 aa11.69□□□□□ -0.54
APP-205ENST00000358918 RNFT1Q5M7Z0 435 aa11.69□□□□□ -0.54
APP-205ENST00000358918 GTF2H5Q6ZYL4 71 aa11.69□□□□□ -0.54
APP-205ENST00000358918 TCF24Q7RTU0 167 aa11.69□□□□□ -0.54
APP-205ENST00000358918 SARAFQ96BY9 339 aa11.69□□□□□ -0.54
APP-205ENST00000358918 VWC2LB2RUY7 222 aa11.69□□□□□ -0.54
APP-205ENST00000358918 H0Y8G0 127 aa11.69□□□□□ -0.54
APP-205ENST00000358918 CCL11P51671 97 aa11.69□□□□□ -0.54
APP-205ENST00000358918 SEC11AP67812 179 aa11.69□□□□□ -0.54
APP-205ENST00000358918 PRCDQ00LT1 54 aa11.69□□□□□ -0.54
APP-205ENST00000358918 FER1L6-AS1Q8NA97 138 aa11.69□□□□□ -0.54
APP-205ENST00000358918 PAXXQ9BUH6 204 aa11.69□□□□□ -0.54
APP-205ENST00000358918 HSPB8Q9UJY1 196 aa11.69□□□□□ -0.54
APP-205ENST00000358918 RPH3ALQ9UNE2 315 aa11.69□□□□□ -0.54
APP-205ENST00000358918 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
APP-205ENST00000358918 LOXL3P58215 753 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms