RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 DMRTA2Q96SC8 542 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 RAMP3O60896 148 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 LCN12Q6JVE5 192 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 SLX1AQ9BQ83 275 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 GGTLC1Q9BX51 225 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 SLC25A15Q9Y619 301 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 SPINK8P0C7L1 97 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 Q6ZT83 130 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 SLC50A1Q9BRV3 221 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 SAA1P0DJI8 122 aaPredicted RBP10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 PRCDQ00LT1 54 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 SPEM2Q0P670 501 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 ZNF71Q9NQZ8 489 aaPredicted RBP10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 CHCHD2Q9Y6H1 151 aaPredicted RBP10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 Q0VG73 95 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 NMSQ5H8A3 153 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 KLF17Q5JT82 389 aaPredicted RBP10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 FBXL15Q9H469 300 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 FOXC1Q12948 553 aa10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 MRPL20Q9BYC9 149 aaKnown RBP10.61□□□□□ -0.71
SYNCRIP-201ENST00000355238 GLRXP35754 106 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 FAM90A2PQ658T7 463 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 MGST2Q99735 147 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 SEC16AO15027 2179 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 TRAV12-3A0A0B4J271 114 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 IQCF6A8MYZ5 107 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 MST1LQ2TV78 715 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 FAM166AQ6J272 317 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 COL11A1P12107 1806 aaPredicted RBP10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 IGHV3OR16-12A0A075B7B8 117 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 PRTN3P24158 256 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 PGPEP1Q9NXJ5 209 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 FBXL7Q9UJT9 491 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 LOC105371242A0A075B767 164 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 TMEM238C9JI98 176 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 RHOGP84095 191 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 TMEM155Q4W5P6 130 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 RTN4RL2Q86UN3 420 aa10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
SYNCRIP-201ENST00000355238 IGHV3-35A0A0C4DH35 117 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 IGKV3OR2-268A0A0C4DH90 116 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 LAGE3Q14657 143 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 TMEM14EPQ6UXP3 125 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 ADAMTSL5Q6ZMM2 481 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 WBP1Q96G27 269 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 LINC00312Q9Y6C7 94 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 ADAMTSL1Q8N6G6 1762 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 PIKFYVEQ9Y2I7 2098 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 TGFBR3LH3BV60 316 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 OR9G9P0C7N8 305 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 GTSCR1Q86UQ5 136 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 SAA2-SAA4A0A096LPE2 208 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 SAA2P0DJI9 122 aaPredicted RBP10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 TMEM171Q8WVE6 324 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 DUX5Q96PT3 197 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 TRIP12Q14669 1992 aaPredicted RBP10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 TRAV8-1A0A0A6YYK1 113 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 M0R2P5 195 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 IGHV2-5P01817 119 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 TIMP4Q99727 224 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 GBF1Q92538 1859 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 MORN2Q502X0 79 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 FAM71F2Q6NXP2 309 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 KIAA0100Q14667 2235 aaKnown RBP10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 ZNF236Q9UL36 1845 aa10.59□□□□□ -0.71
SYNCRIP-201ENST00000355238 TDRD15B5MCY1 1934 aaKnown RBP10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 DUTP33316 252 aaKnown RBP10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 C10orf91Q5T1B1 145 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 C1orf162Q8NEQ5 155 aaPredicted RBP10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 DNAJC13O75165 2243 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 RNF125Q96EQ8 232 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 DPM3Q9P2X0 92 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 C8orf46Q8TAG6 207 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 NUP35Q8NFH5 326 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 DCTN5Q9BTE1 182 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 RGPD3A6NKT7 1758 aaPredicted RBP10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 RGPD4Q7Z3J3 1758 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGHV3OR16-13A0A075B7E8 117 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGHV3-74A0A0B4J1X5 117 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 TDGF1P13385 188 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 DEFB123Q8N688 67 aa10.58□□□□□ -0.72
SYNCRIP-201ENST00000355238 NPSP0C0P6 89 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 PSG3Q16557 428 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 SLC25A45Q8N413 288 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 ARPC1AQ92747 370 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 PSG7Q13046 419 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 ZNF319Q9P2F9 582 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 GGTLC3B5MD39 225 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 D6R8Y8 96 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 SMAD7O15105 426 aaKnown RBP10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 EVI2AP22794 236 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 SIGLEC12Q96PQ1 595 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 RP1L1Q8IWN7 2480 aaPredicted RBP10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 LHX2P50458 406 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 CDCP2Q5VXM1 449 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 NPFFR1Q9GZQ6 430 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 WNK3Q9BYP7 1800 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms