RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 UBAC2Q8NBM4 344 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 DCUN1D4Q92564 292 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 BSCL2Q96G97 398 aaPredicted RBP9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 CCDC140Q96MF4 163 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 MCRIP2Q9BUT9 160 aaKnown RBP9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 RCL1Q9Y2P8 373 aaKnown RBP9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 C15orf62A8K5M9 175 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 K7EPK0 472 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 BMPR1BO00238 502 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 OVOL1O14753 267 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 NUPL2O15504 423 aaKnown RBP9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 TGOLN2O43493 480 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 GNG7O60262 68 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 TSC22D2O75157 780 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 OR2C1O95371 312 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 TRBV12-3P01733 135 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 IGHV3-48P01763 117 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 GPR183P32249 361 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 BCAP31P51572 246 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 SLURP1P55000 103 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 S100A10P60903 97 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 RAB32Q13637 225 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 KLF5Q13887 457 aaPredicted RBP9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 C11orf87Q6NUJ2 197 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 GPHB5Q86YW7 130 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 TMEM170AQ8WVE7 144 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 CACNG8Q8WXS5 425 aa9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 DLX4Q92988 240 aaPredicted RBP9.16□□□□□ -0.94
SPTLC1-202ENST00000337841 TRAV30A0A087WSZ9 112 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 OR2T8A6NH00 312 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 PPP5D1E7EU14 171 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 TMEM50AO95807 157 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 PAX9P55771 341 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 CD69Q07108 199 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 FCN2Q15485 313 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 OR4X1Q8NH49 305 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 RCC1LQ96I51 464 aaKnown RBP9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 OR4C12Q96R67 309 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 ELOVL1Q9BW60 279 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 GPR61Q9BZJ8 451 aa9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 FNDC4Q9H6D8 234 aaPredicted RBP9.15□□□□□ -0.94
SPTLC1-202ENST00000337841 ZNF320A2RRD8 509 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 H3BP45 60 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 CLN5O75503 358 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 SCAF4O95104 1147 aaKnown RBP9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 CTSGP08311 255 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 H2BFSP57053 126 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 SYNJ2BPP57105 145 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 RRAS2P62070 204 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 RELQ04864 619 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 PRSS54Q6PEW0 395 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 SLC16A13Q7RTY0 426 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 C1QL4Q86Z23 238 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 TMEM116Q8NCL8 245 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 OR10P1Q8NGE3 313 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 SLC35E1Q96K37 410 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 ZC4H2Q9NQZ6 224 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 PEMTQ9UBM1 199 aa9.14□□□□□ -0.95
SPTLC1-202ENST00000337841 E5RGE8 158 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 PET100P0DJ07 73 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 CXCL3P19876 107 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 CAV2P51636 162 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 RND2P52198 227 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 LRRC37A5PQ49AS3 106 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 OR8G2PQ6IF36 304 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 TMEM14EPQ6UXP3 125 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 PPP1R1CQ8WVI7 109 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 ASB13Q8WXK3 278 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 NPIPB3Q92617 1050 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 ACY3Q96HD9 319 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 CHRDL1Q9BU40 450 aa9.13□□□□□ -0.95
SPTLC1-202ENST00000337841 FAM24AA6NFZ4 105 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 SEC14L6B5MCN3 397 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 F8W735 103 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 LGALS9O00182 355 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 NDUFA4O00483 81 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 DEDDO75618 318 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 METTL15P1P0C7V9 234 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 IGLL1P15814 213 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 ADMP35318 185 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 INSL3P51460 131 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 GAMTQ14353 236 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 C9orf66Q5T8R8 295 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 OR11H7Q8NGC8 314 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 OR1S2Q8NGQ3 325 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 Q8WTZ3 238 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 ZNF436Q9C0F3 470 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 SLC25A31Q9H0C2 315 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 UFC1Q9Y3C8 167 aa9.12□□□□□ -0.95
SPTLC1-202ENST00000337841 IGHV3-35A0A0C4DH35 117 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 YIF1AO95070 293 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 MPC2O95563 127 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 FABP1P07148 127 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 GIPP09681 153 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 OR10J1P30954 320 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 P2RY1P47900 373 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 FGL1Q08830 312 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 ZNF600Q6ZNG1 722 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 REC114Q7Z4M0 266 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms