RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 GGTLC3B5MD39 225 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 K7ERU9 68 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 LINC00869P0C866 280 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 OR5B3Q8NH48 314 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 IGHV2-26A0A0B4J1V2 119 aa11.27□□□□□ -0.6
SYNE3-201ENST00000334258 FAM181BA6NEQ2 426 aa11.27□□□□□ -0.6
SYNE3-201ENST00000334258 TAS2R45P59539 299 aa11.27□□□□□ -0.6
SYNE3-201ENST00000334258 ABI3Q9P2A4 366 aa11.27□□□□□ -0.6
SYNE3-201ENST00000334258 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.6
SYNE3-201ENST00000334258 MORN2Q502X0 79 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 EBLN2Q6P2I7 272 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 TRAT1Q6PIZ9 186 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 OR8B2Q96RD0 313 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 IGHV1-69-2A0A0G2JMI3 117 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 CCL11P51671 97 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 HSPE1P61604 102 aaKnown RBP11.27□□□□□ -0.61
SYNE3-201ENST00000334258 OR4A47Q6IF82 309 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 WDR82Q6UXN9 313 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 SPACA3Q8IXA5 215 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 OR4S2Q8NH73 311 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 ZC2HC1AQ96GY0 325 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 TP73-AS1Q9UF72 201 aa11.27□□□□□ -0.61
SYNE3-201ENST00000334258 TIMM8BQ9Y5J9 83 aaPredicted RBP11.27□□□□□ -0.61
SYNE3-201ENST00000334258 SMIM27A0A1W2PRY6 76 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 IQCF6A8MYZ5 107 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 REG1AP05451 166 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 PRR20EP86478 221 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 PRR20CP86479 221 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 PRR20DP86480 221 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 PRR20BP86481 221 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 PRR20AP86496 221 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 OR2D3Q8NGH3 330 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 LRRC29Q8WV35 223 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 CXXC4Q9H2H0 198 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 SAP30LQ9HAJ7 183 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 HES4Q9HCC6 221 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 CADP27708 2225 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 PRDX2P32119 198 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 C11orf53Q8IXP5 236 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 OR2T6Q8NHC8 308 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 SLC25A10Q9UBX3 287 aaPredicted RBP11.26□□□□□ -0.61
SYNE3-201ENST00000334258 DUSP13Q9UII6 198 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 SP1P08047 785 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 FTH1P19P0C7X4 201 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 PPOXP50336 477 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
SYNE3-201ENST00000334258 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 PNKDQ8N490 385 aa11.26□□□□□ -0.61
SYNE3-201ENST00000334258 MRPL27Q9P0M9 148 aaKnown RBP11.26□□□□□ -0.61
SYNE3-201ENST00000334258 C15orf61A6NNL5 157 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 H0Y8G0 127 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 C15orf65H3BRN8 121 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 AGFG2O95081 481 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 SERTM2A0A1B0GWG4 89 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 IGLC7A0M8Q6 106 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 NUDT3O95989 172 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 ZNF134P52741 427 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 MLANAQ16655 118 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 PRSS57Q6UWY2 283 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 FAM214BQ7L5A3 538 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 CD177Q8N6Q3 437 aa11.25□□□□□ -0.61
SYNE3-201ENST00000334258 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
SYNE3-201ENST00000334258 WT1P19544 449 aaPredicted RBP11.24□□□□□ -0.61
SYNE3-201ENST00000334258 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 BSNQ9UPA5 3926 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 COL6A6A6NMZ7 2263 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 TRAV5A0A0B4J249 113 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 J3QR06 171 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 CA7P43166 264 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 FOXA3P55318 350 aaPredicted RBP11.24□□□□□ -0.61
SYNE3-201ENST00000334258 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 STXBP6Q8NFX7 210 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 SGK494Q96LW2 274 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 OR2V2Q96R30 315 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 TNFRSF19Q9NS68 423 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 TRGV8A0A0C4DH27 118 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 SH2D7A6NKC9 451 aaPredicted RBP11.24□□□□□ -0.61
SYNE3-201ENST00000334258 IGLV2-8P01709 118 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 KIR3DL3Q8N743 410 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 OR9G1Q8NH87 305 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 ZNF503Q96F45 646 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 TMEM70Q9BUB7 260 aa11.24□□□□□ -0.61
SYNE3-201ENST00000334258 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
SYNE3-201ENST00000334258 IGHV3OR15-7A0A075B7D8 119 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 OR4C46A6NHA9 309 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 MEOX1P50221 254 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 NUP35Q8NFH5 326 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 PRR7Q8TB68 274 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 JPT1Q9UK76 154 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 ZNF883P0CG24 379 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 SAMD13Q5VXD3 122 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 MUC15Q8N387 334 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 ZNRF1Q8ND25 227 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 OR4F17Q8NGA8 305 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 SARAFQ96BY9 339 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 COMMD5Q9GZQ3 224 aa11.23□□□□□ -0.61
SYNE3-201ENST00000334258 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms