RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ZNF891A8MT65 544 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-201ENST00000318607 ISLRO14498 428 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 LINC00614P0C842 121 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 LINC00869P0C866 280 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 PF4V1P10720 104 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 DHRS13Q6UX07 377 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 NIT1Q86X76 327 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 Q8IYB0 196 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 OR1B1Q8NGR6 318 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 MBNL3Q9NUK0 354 aaKnown RBP11.67□□□□□ -0.54
PABPC1-201ENST00000318607 KLF13Q9Y2Y9 288 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-201ENST00000318607 AMMECR1Q9Y4X0 333 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-201ENST00000318607 TRGV5A0A0B4J1U4 118 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 PPIAL4DF5H284 164 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 YPEL1O60688 119 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 CENPVQ7Z7K6 275 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-201ENST00000318607 Q8N7P7 452 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 H1FXQ92522 213 aaKnown RBP11.67□□□□□ -0.54
PABPC1-201ENST00000318607 YPEL2Q96QA6 119 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 CCL13Q99616 98 aa11.67□□□□□ -0.54
PABPC1-201ENST00000318607 C10orf142B7Z368 130 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 IGHV1-2P23083 117 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 PRRX1P54821 245 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 TET2Q6N021 2002 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-201ENST00000318607 WFDC8Q8IUA0 241 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 COL12A1Q99715 3063 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 S4R3C0 116 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 B9A039 149 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 AMY1AP04745 511 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 C18orf32Q8TCD1 76 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 NPIPB3Q92617 1050 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 BCL2L2Q92843 193 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-201ENST00000318607 SERTM2A0A1B0GWG4 89 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 M0R1B8 84 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
PABPC1-201ENST00000318607 CDX2Q99626 313 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-201ENST00000318607 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.66□□□□□ -0.548e-7■■■■□ 25.6
PABPC1-201ENST00000318607 IGKV1OR2-108A0A075B7D4 117 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 MORN2Q502X0 79 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 COMMD5Q9GZQ3 224 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 K7ESF4 209 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 LAMTOR5O43504 91 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 CX3CL1P78423 397 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 ZNF146Q15072 292 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 LINC00596Q86U02 117 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
PABPC1-201ENST00000318607 AP1S3Q96PC3 154 aa11.65□□□□□ -0.54
PABPC1-201ENST00000318607 SAA2-SAA4A0A096LPE2 208 aa11.65□□□□□ -0.55
PABPC1-201ENST00000318607 TMEM238C9JI98 176 aa11.65□□□□□ -0.55
PABPC1-201ENST00000318607 MMP23AO75900 390 aa11.65□□□□□ -0.55
PABPC1-201ENST00000318607 SAA2P0DJI9 122 aaPredicted RBP11.65□□□□□ -0.55
PABPC1-201ENST00000318607 TNFSF4P23510 183 aa11.65□□□□□ -0.55
PABPC1-201ENST00000318607 UBE2V1Q13404 147 aa11.65□□□□□ -0.55
PABPC1-201ENST00000318607 KRTAP27-1Q3LI81 207 aa11.65□□□□□ -0.55
PABPC1-201ENST00000318607 SPACA3Q8IXA5 215 aa11.65□□□□□ -0.55
PABPC1-201ENST00000318607 OR8A1Q8NGG7 326 aa11.65□□□□□ -0.55
PABPC1-201ENST00000318607 FNDC4Q9H6D8 234 aaPredicted RBP11.65□□□□□ -0.55
PABPC1-201ENST00000318607 PGPA6NDG6 321 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 FAM181BA6NEQ2 426 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 M0R296 226 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 CHEK1O14757 476 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 SRSF6Q13247 344 aaKnown RBP11.64□□□□□ -0.55
PABPC1-201ENST00000318607 TMEM164Q5U3C3 297 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 OR2V2Q96R30 315 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 COX11Q9Y6N1 276 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 ANKRD11Q6UB99 2663 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-201ENST00000318607 SPATA12Q7Z6I5 190 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 NUP35Q8NFH5 326 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 CHRDL1Q9BU40 450 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 ZZEF1O43149 2961 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 RELNP78509 3460 aa11.64□□□□□ -0.55
PABPC1-201ENST00000318607 TNRC6BQ9UPQ9 1833 aaKnown RBP11.63□□□□□ -0.55
PABPC1-201ENST00000318607 KLK10O43240 276 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 CCL8P80075 99 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 NEUROG1Q92886 237 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 F11RQ9Y624 299 aaKnown RBP11.63□□□□□ -0.55
PABPC1-201ENST00000318607 LRBAP50851 2863 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 HSPE1P61604 102 aaKnown RBP11.63□□□□□ -0.55
PABPC1-201ENST00000318607 NUDT10Q8NFP7 164 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 OR4S2Q8NH73 311 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 NUDT11Q96G61 164 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 GNB1LQ9BYB4 327 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 SPRR3Q9UBC9 169 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 HLA-DQA1P01909 254 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 TEX45Q8NA69 505 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 IGFBPL1Q8WX77 278 aa11.63□□□□□ -0.55
PABPC1-201ENST00000318607 LEPROTL1O95214 131 aa11.62□□□□□ -0.55
PABPC1-201ENST00000318607 CECR9P0C854 216 aa11.62□□□□□ -0.55
PABPC1-201ENST00000318607 ERVK11-1P61568 191 aa11.62□□□□□ -0.55
PABPC1-201ENST00000318607 SELENOTP62341 195 aa11.62□□□□□ -0.55
PABPC1-201ENST00000318607 SRSF7Q16629 238 aaKnown RBP eCLIP11.62□□□□□ -0.55
PABPC1-201ENST00000318607 Q8N976 141 aa11.62□□□□□ -0.55
PABPC1-201ENST00000318607 CALYQ9NYX4 217 aa11.62□□□□□ -0.55
PABPC1-201ENST00000318607 TRBV6-6A0A0A6YYG2 114 aa11.62□□□□□ -0.55
PABPC1-201ENST00000318607 K7EMI3 77 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms