RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SGK494Q96LW2 274 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 RNASE7Q9H1E1 156 aaKnown RBP9.33□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM133Q9H2Q1 129 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM167BQ9NRX6 74 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 MRPL36Q9P0J6 103 aaKnown RBP9.33□□□□□ -0.92
PTPN2-201ENST00000309660 DCHS2Q6V1P9 2916 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 A0A1W2PN81 502 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 PPOXP50336 477 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 LINC00479Q96M42 142 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 A0A1W2PPI3 338 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 B9A039 149 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 H3BTX0 84 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 AMBPP02760 352 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 SUB1P53999 127 aaKnown RBP eCLIP9.32□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM167AQ8TBQ9 72 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 EAF1Q96JC9 268 aaPredicted RBP9.32□□□□□ -0.92
PTPN2-201ENST00000309660 TXNDC17Q9BRA2 123 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 GGTLC3B5MD39 225 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 C8orf88P0DMB2 117 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 AREGP15514 252 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 RAB4BP61018 213 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 GSX1Q9H4S2 264 aaPredicted RBP9.32□□□□□ -0.92
PTPN2-201ENST00000309660 DNAJC4Q9NNZ3 241 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 ZNF355PQ9NSJ1 428 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 ASH1LQ9NR48 2969 aaKnown RBP9.32□□□□□ -0.92
PTPN2-201ENST00000309660 CD24P25063 80 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 CNN1P51911 297 aaKnown RBP9.32□□□□□ -0.92
PTPN2-201ENST00000309660 TIGITQ495A1 244 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 ACTL10Q5JWF8 245 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 OR1B1Q8NGR6 318 aa9.32□□□□□ -0.92
PTPN2-201ENST00000309660 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 PPIAL4CA0A0B4J2A2 164 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 CGB1A6NKQ9 187 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 IGHV2-70P01814 119 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 FRMD6-AS1P0C7T7 363 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 PPIAL4GP0DN37 164 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 CDSNQ15517 529 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 C10orf113Q5VZT2 155 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 OR8I2Q8N0Y5 310 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 RPEQ96AT9 228 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 SLC25A33Q9BSK2 321 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 TRAV34A0A0B4J273 112 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 PRB4P10163 310 aaPredicted RBP9.31□□□□□ -0.92
PTPN2-201ENST00000309660 IER3P46695 156 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 ST6GALNAC6Q969X2 333 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 FBXL15Q9H469 300 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 CSMD1Q96PZ7 3565 aa9.31□□□□□ -0.92
PTPN2-201ENST00000309660 IGLV2-23P01705 113 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 MC5RP33032 325 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 RANP62826 216 aaKnown RBP9.3□□□□□ -0.92
PTPN2-201ENST00000309660 FAM209BQ5JX69 171 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 HILPDAQ9Y5L2 63 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 CA1P00915 261 aaPredicted RBP9.3□□□□□ -0.92
PTPN2-201ENST00000309660 RPL27AP46776 148 aaKnown RBP9.3□□□□□ -0.92
PTPN2-201ENST00000309660 ARF6P62330 175 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 LCN2P80188 198 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 RUSC1-AS1Q66K80 236 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM256Q8N2U0 113 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 PNKDQ8N490 385 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 TOX4O94842 621 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 CD99P14209 185 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 LEMD1Q68G75 181 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 MMD2Q8IY49 270 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 CACNG8Q8WXS5 425 aa9.3□□□□□ -0.92
PTPN2-201ENST00000309660 FCN1O00602 326 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 SIAH2O43255 324 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 ADMP35318 185 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 PRRX1P54821 245 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 DLX6P56179 175 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 ZNF672Q499Z4 452 aaPredicted RBP9.29□□□□□ -0.92
PTPN2-201ENST00000309660 LINC00305Q7Z4B0 112 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 C11orf42Q8N5U0 333 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 PAXXQ9BUH6 204 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 TNFRSF19Q9NS68 423 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 DMRT1Q9Y5R6 373 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 CNIH1O95406 144 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 FOXL1Q12952 345 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 OR1L6Q8NGR2 347 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 SSBP3Q9BWW4 388 aaPredicted RBP9.29□□□□□ -0.92
PTPN2-201ENST00000309660 SNURFLB1AK76 121 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 FNDC10F2Z333 226 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 TNFRSF13BO14836 293 aaPredicted RBP9.29□□□□□ -0.92
PTPN2-201ENST00000309660 HIST1H1BP16401 226 aaKnown RBP9.29□□□□□ -0.92
PTPN2-201ENST00000309660 BPIFB3P59826 476 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 RPEL1Q2QD12 228 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 MRPL54Q6P161 138 aaKnown RBP9.29□□□□□ -0.92
PTPN2-201ENST00000309660 CLEC7AQ9BXN2 247 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 COL25A1Q9BXS0 654 aaPredicted RBP9.29□□□□□ -0.92
PTPN2-201ENST00000309660 KAAG1Q9UBP8 84 aa9.29□□□□□ -0.92
PTPN2-201ENST00000309660 CD33P20138 364 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 GNG5P63218 68 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 KIAA1644Q3SXP7 199 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 C22orf15Q8WYQ4 148 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM18Q96B42 140 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 IL36BQ9NZH7 164 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms