RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 HOXA3O43365 443 aaPredicted RBP9.04□□□□□ -0.96
PKNOX1-201ENST00000291547 TRGV3P03979 118 aa9.04□□□□□ -0.96
PKNOX1-201ENST00000291547 COQ2Q96H96 371 aa9.04□□□□□ -0.96
PKNOX1-201ENST00000291547 RTBDNQ9BSG5 229 aaPredicted RBP9.04□□□□□ -0.96
PKNOX1-201ENST00000291547 TRAV8-4A0A0B4J246 113 aa9.04□□□□□ -0.96
PKNOX1-201ENST00000291547 OR5P3Q8WZ94 311 aa9.04□□□□□ -0.96
PKNOX1-201ENST00000291547 CACNA1GO43497 2377 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 HBDP02042 147 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 FAM71F2Q6NXP2 309 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 TMEM74BQ9NUR3 256 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 DPM2O94777 84 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 FTH1P19P0C7X4 201 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 CCL20P78556 96 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 RNF126Q9BV68 326 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 Q9H3A6 140 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 GHRHP01286 108 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 RSPO4Q2I0M5 234 aaPredicted RBP9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 GAGE13Q4V321 117 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 C21orf62Q9NYP8 219 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 MRPS18CQ9Y3D5 142 aaKnown RBP9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 SLC25A20O43772 301 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 CENPVQ7Z7K6 275 aaPredicted RBP9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 SRXN1Q9BYN0 137 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 FBXL7Q9UJT9 491 aa9.03□□□□□ -0.96
PKNOX1-201ENST00000291547 CD69Q07108 199 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 MST1LQ2TV78 715 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 SCARF2Q96GP6 870 aaPredicted RBP9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 CST9LQ9H4G1 147 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 PLXNA4Q9HCM2 1894 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 K7EP13 123 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 CEACAM1P13688 526 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 PLNP26678 52 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 GAS1P54826 345 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 DUX3Q96PT4 197 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 IGHV3OR16-10A0A075B7F0 116 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 SEC11AP67812 179 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 RNF182Q8N6D2 247 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 CACNG8Q8WXS5 425 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 CSTL1Q9H114 145 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 RNF115Q9Y4L5 304 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 HS3ST3B1Q9Y662 390 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 CADP27708 2225 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 C4orf51C9J302 202 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 NAPSAO96009 420 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 PPBPP02775 128 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 ARTNQ5T4W7 220 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 SRCAPQ6ZRS2 3230 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 DCTN5Q9BTE1 182 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 TM2D1Q9BX74 207 aa9.02□□□□□ -0.97
PKNOX1-201ENST00000291547 SPTBN2O15020 2390 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 IGHV1-69-2A0A0G2JMI3 117 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 NKX2-8O15522 239 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 EGR4Q05215 589 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 NAA38Q9BRA0 125 aaKnown RBP9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 SELENOKQ9Y6D0 94 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 IFI6P09912 130 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 GNG5P63218 68 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 FABP5P3A8MUU1 101 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 IGLV3-19P01714 112 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 ESDP10768 282 aa9.01□□□□□ -0.97
PKNOX1-201ENST00000291547 NPIPB13A6NJU9 1138 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 GGTLC3B5MD39 225 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 HSD52Q0P140 79 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 CTHRC1Q96CG8 243 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 OSTCQ9NRP0 149 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 PILRBQ9UKJ0 227 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 CYSLTR1Q9Y271 337 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 CHD5Q8TDI0 1954 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 NOTCH3Q9UM47 2321 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 GBF1Q92538 1859 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 A0A0U1RRA0 63 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 LYL1P12980 280 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 RNASE4P34096 147 aaKnown RBP9□□□□□ -0.97
PKNOX1-201ENST00000291547 FHL5Q5TD97 284 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 ZFAND6Q6FIF0 208 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 TEX38Q6PEX7 206 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 TMEM144Q7Z5S9 345 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 ITLN2Q8WWU7 325 aaPredicted RBP9□□□□□ -0.97
PKNOX1-201ENST00000291547 POLR3KQ9Y2Y1 108 aaPredicted RBP9□□□□□ -0.97
PKNOX1-201ENST00000291547 IGHMP01871 453 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 CDCP2Q5VXM1 449 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 OR13A1Q8NGR1 328 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 ST20Q9HBF5 79 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 SPANXA1Q9NS26 97 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 DPM3Q9P2X0 92 aa9□□□□□ -0.97
PKNOX1-201ENST00000291547 NXT2Q9NPJ8 142 aaKnown RBP9□□□□□ -0.97
PKNOX1-201ENST00000291547 KIR2DL5BA0A0G2JN68 375 aa8.99□□□□□ -0.97
PKNOX1-201ENST00000291547 KIR2DL5BA0A0G2JPC4 375 aa8.99□□□□□ -0.97
PKNOX1-201ENST00000291547 J3QW42 95 aa8.99□□□□□ -0.97
PKNOX1-201ENST00000291547 SRSF1Q07955 248 aaKnown RBP eCLIP8.99□□□□□ -0.97
PKNOX1-201ENST00000291547 ACP7Q6ZNF0 438 aa8.99□□□□□ -0.97
PKNOX1-201ENST00000291547 KIR2DL5AQ8N109 375 aa8.99□□□□□ -0.97
PKNOX1-201ENST00000291547 OCC1Q8TAD7 63 aa8.99□□□□□ -0.97
PKNOX1-201ENST00000291547 IFI27L1Q96BM0 104 aa8.99□□□□□ -0.97
PKNOX1-201ENST00000291547 HEATR1Q9H583 2144 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms