RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CSPG4Q6UVK1 2322 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 NCBP2LA6PVI3 153 aaKnown RBP14.36□□□□□ -0.11
CAPN1-201ENST00000279247 VENTXO95231 258 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 NAT8Q9UHE5 227 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 PTPN13Q12923 2485 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 OR5G3P0C626 314 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 EFNA4P52798 201 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 RAB5BP61020 215 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 DYNAPQ8N1N2 210 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 TEX45Q8NA69 505 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 SRSF12Q8WXF0 261 aaKnown RBP14.36□□□□□ -0.11
CAPN1-201ENST00000279247 RPL23P62829 140 aaKnown RBP14.35□□□□□ -0.11
CAPN1-201ENST00000279247 ELOBQ15370 118 aa14.35□□□□□ -0.11
CAPN1-201ENST00000279247 TMEM37Q8WXS4 190 aa14.35□□□□□ -0.11
CAPN1-201ENST00000279247 IGHV3OR16-10A0A075B7F0 116 aa14.35□□□□□ -0.11
CAPN1-201ENST00000279247 ORM2P19652 201 aa14.35□□□□□ -0.11
CAPN1-201ENST00000279247 SNRPEP62304 92 aaKnown RBP14.35□□□□□ -0.11
CAPN1-201ENST00000279247 AGAP20933 346 aa14.34□□□□□ -0.11
CAPN1-201ENST00000279247 COMPP49747 757 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-201ENST00000279247 TMEM250H0YL14 139 aa14.34□□□□□ -0.11
CAPN1-201ENST00000279247 TSPAN9O75954 239 aa14.34□□□□□ -0.11
CAPN1-201ENST00000279247 S100A6P06703 90 aa14.34□□□□□ -0.11
CAPN1-201ENST00000279247 PRTN3P24158 256 aa14.34□□□□□ -0.11
CAPN1-201ENST00000279247 KLF17Q5JT82 389 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-201ENST00000279247 CYP2G1PQ6ZSU1 146 aa14.34□□□□□ -0.11
CAPN1-201ENST00000279247 C16orf82Q7Z2V1 217 aa14.34□□□□□ -0.11
CAPN1-201ENST00000279247 LY6LH3BQJ8 138 aa14.33□□□□□ -0.11
CAPN1-201ENST00000279247 OR4X1Q8NH49 305 aa14.33□□□□□ -0.11
CAPN1-201ENST00000279247 NRGNQ92686 78 aa14.33□□□□□ -0.11
CAPN1-201ENST00000279247 TUBA4BQ9H853 241 aa14.33□□□□□ -0.11
CAPN1-201ENST00000279247 FUT9Q9Y231 359 aa14.33□□□□□ -0.11
CAPN1-201ENST00000279247 A0A0U1RQK1 487 aa14.33□□□□□ -0.12
CAPN1-201ENST00000279247 PNRC1Q12796 327 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-201ENST00000279247 FSTL3O95633 263 aa14.33□□□□□ -0.12
CAPN1-201ENST00000279247 MT-CO2P00403 227 aa14.33□□□□□ -0.12
CAPN1-201ENST00000279247 RBP4P02753 201 aa14.33□□□□□ -0.12
CAPN1-201ENST00000279247 ZNF114Q8NC26 417 aa14.33□□□□□ -0.12
CAPN1-201ENST00000279247 ELOVL1Q9BW60 279 aa14.33□□□□□ -0.12
CAPN1-201ENST00000279247 COX7A2P2O60397 106 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 COL8A1P27658 744 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 NANPQ8TBE9 248 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 CACNG8Q8WXS5 425 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 CLDN34H7C241 214 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 IGHV2-5P01817 119 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 PYYP10082 97 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 CEACAM3P40198 252 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 SRSF1Q07955 248 aaKnown RBP eCLIP14.32□□□□□ -0.12
CAPN1-201ENST00000279247 OR11H6Q8NGC7 330 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 OR1B1Q8NGR6 318 aa14.32□□□□□ -0.12
CAPN1-201ENST00000279247 HELZ2Q9BYK8 2649 aaKnown RBP14.32□□□□□ -0.12
CAPN1-201ENST00000279247 CRYGBP07316 175 aa14.31□□□□□ -0.12
CAPN1-201ENST00000279247 EAF1Q96JC9 268 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-201ENST00000279247 ABCA2Q9BZC7 2435 aa14.31□□□□□ -0.12
CAPN1-201ENST00000279247 DOPEY2Q9Y3R5 2298 aa14.31□□□□□ -0.12
CAPN1-201ENST00000279247 IGHV4-39P01824 125 aa14.31□□□□□ -0.12
CAPN1-201ENST00000279247 RNASEH2CQ8TDP1 164 aaKnown RBP14.31□□□□□ -0.12
CAPN1-201ENST00000279247 TNFRSF19Q9NS68 423 aa14.31□□□□□ -0.12
CAPN1-201ENST00000279247 A0A087WWC5 75 aa14.31□□□□□ -0.12
CAPN1-201ENST00000279247 M0R1W7 72 aa14.31□□□□□ -0.12
CAPN1-201ENST00000279247 TOX4O94842 621 aa14.31□□□□□ -0.12
CAPN1-201ENST00000279247 GPX4P36969 197 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-201ENST00000279247 TEX22C9J3V5 150 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 H7BYZ3 331 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 NBR2O15453 112 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 PMS2P11Q13670 270 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 LEMD1Q68G75 181 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 OR5AU1Q8NGC0 362 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 ZNF503Q96F45 646 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 WNT10AQ9GZT5 417 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 TECRQ9NZ01 308 aaKnown RBP14.3□□□□□ -0.12
CAPN1-201ENST00000279247 TRBV20OR9-2A0A075B6H5 130 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 IGKV1D-37A0A075B6S9 117 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 H3BTX0 84 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 PDE6DO43924 150 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 HOXB4P17483 251 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-201ENST00000279247 FXYD3Q14802 87 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 DNAJC4Q9NNZ3 241 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 ZNF355PQ9NSJ1 428 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 DMRT1Q9Y5R6 373 aa14.3□□□□□ -0.12
CAPN1-201ENST00000279247 FNDC10F2Z333 226 aa14.29□□□□□ -0.12
CAPN1-201ENST00000279247 PRB4P10163 310 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-201ENST00000279247 SUMO1P63165 101 aaKnown RBP14.29□□□□□ -0.12
CAPN1-201ENST00000279247 CFHR4Q92496 578 aa14.29□□□□□ -0.12
CAPN1-201ENST00000279247 BIN3Q9NQY0 253 aa14.29□□□□□ -0.12
CAPN1-201ENST00000279247 B4DEV8 164 aa14.29□□□□□ -0.12
CAPN1-201ENST00000279247 ATP5IP56385 69 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-201ENST00000279247 UBE2L3P68036 154 aaKnown RBP14.29□□□□□ -0.12
CAPN1-201ENST00000279247 C10orf113Q5VZT2 155 aa14.29□□□□□ -0.12
CAPN1-201ENST00000279247 A0A1W2PPQ1 181 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 CRYBB3P26998 211 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 YPEL4Q96NS1 127 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 TCRBV4S1A1TA0A5B7 111 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 CLN5O75503 358 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 TRGC2P03986 189 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 CTRB1P17538 263 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 CTRB2Q6GPI1 263 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 C22orf15Q8WYQ4 148 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 FAM210BQ96KR6 192 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 CCL19Q99731 98 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 KMT2BQ9UMN6 2715 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms