RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 LY6EQ16553 131 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 MST1LQ2TV78 715 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 TIMM23BQ5SRD1 257 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 SPATA31B1PQ5VZV4 182 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 GPR82Q96P67 336 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 RPP21Q9H633 154 aaKnown RBP11.3□□□□□ -0.6
TCF3-201ENST00000262965 CACNA1AO00555 2505 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 TRAV5A0A0B4J249 113 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 DUTP33316 252 aaKnown RBP11.3□□□□□ -0.6
TCF3-201ENST00000262965 FOXF2Q12947 444 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 OR10W1Q8NGF6 305 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 IQCF6A8MYZ5 107 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 Q6ZRM9 215 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 PCNX2A6NKB5 2137 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 WDR87Q6ZQQ6 2873 aa11.3□□□□□ -0.6
TCF3-201ENST00000262965 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 E9PLN8 166 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 NDUFA2O43678 99 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 YLPM1P49750 1951 aaKnown RBP11.29□□□□□ -0.6
TCF3-201ENST00000262965 TMEM238LA0A1B0GVL6 79 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 A6NJY4 79 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 OR11H12B2RN74 326 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 LINC01551Q86U37 167 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 OR11H1Q8NG94 326 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 OR11H2Q8NH07 326 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 IZUMO1RA6ND01 250 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 SNCGO76070 127 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 TEX45Q8NA69 505 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 Q9H3A6 140 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 GPX1P07203 203 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
TCF3-201ENST00000262965 LCN12Q6JVE5 192 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 SEPSECSQ9HD40 501 aaKnown RBP11.28□□□□□ -0.6
TCF3-201ENST00000262965 RNF115Q9Y4L5 304 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 DLX6P56179 175 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 C15orf61A6NNL5 157 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 SP9P0CG40 484 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 ATP5IP56385 69 aaPredicted RBP11.28□□□□□ -0.6
TCF3-201ENST00000262965 GGNQ86UU5 652 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
TCF3-201ENST00000262965 ZNF524Q96C55 264 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 RAXQ9Y2V3 346 aa11.28□□□□□ -0.6
TCF3-201ENST00000262965 ALKBH7Q9BT30 221 aaPredicted RBP11.27□□□□□ -0.6
TCF3-201ENST00000262965 C9orf172C9J069 976 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 H3BUT2 72 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 UPK2O00526 184 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 TGFAP01135 160 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 TYMSP04818 313 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 MYOD1P15172 320 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.61
TCF3-201ENST00000262965 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
TCF3-201ENST00000262965 CACNG8Q8WXS5 425 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 FOXC2Q99958 501 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 NAA38Q9BRA0 125 aaKnown RBP11.27□□□□□ -0.61
TCF3-201ENST00000262965 CSPG4Q6UVK1 2322 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 TRAV3A0A0B4J244 114 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 C9JCJ5 164 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 NPPCP23582 126 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 METRNQ9UJH8 293 aa11.27□□□□□ -0.61
TCF3-201ENST00000262965 LYNX1G3V0Z9 82 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 LYNX1P0DP58 116 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 GPR183P32249 361 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 RPS20P60866 119 aaKnown RBP11.26□□□□□ -0.61
TCF3-201ENST00000262965 SAPCD1Q5SSQ6 148 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 FAM53AQ6NSI3 398 aaPredicted RBP11.26□□□□□ -0.61
TCF3-201ENST00000262965 TMEM105Q8N8V8 129 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 A0A1B0GUS0 222 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 YPEL1O60688 119 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 IGKV1D-33P01593 117 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 IGKV1-33P01594 117 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 GZMBP10144 247 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 TMEM170BQ5T4T1 132 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 YPEL2Q96QA6 119 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 DYSFO75923 2080 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 LOC105371242A0A075B767 164 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 SS18L1O75177 396 aaPredicted RBP11.26□□□□□ -0.61
TCF3-201ENST00000262965 PSG9Q00887 426 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 DYNLRB2Q8TF09 96 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 AGMATQ9BSE5 352 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 CRIM1Q9NZV1 1036 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 THADAQ6YHU6 1953 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 PLXNA3P51805 1871 aa11.26□□□□□ -0.61
TCF3-201ENST00000262965 SMIM13P0DJ93 91 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 ID1P41134 155 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 CD69Q07108 199 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 BSPH1Q075Z2 132 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 C20orf204Q6ZNR8 217 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 OSTCQ9NRP0 149 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 ZGRF1Q86YA3 2104 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 ZNF664Q8N3J9 261 aa11.25□□□□□ -0.61
TCF3-201ENST00000262965 TMEM242Q9NWH2 141 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms