RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 SCARB1Q8WTV0 552 aa18.91■□□□□ 0.62
SCN1B-201ENST00000262631 CITED2Q99967 270 aaPredicted RBP18.91■□□□□ 0.62
SCN1B-201ENST00000262631 MRPL36Q9P0J6 103 aaKnown RBP18.91■□□□□ 0.62
SCN1B-201ENST00000262631 CORTO00230 105 aa18.9■□□□□ 0.62
SCN1B-201ENST00000262631 IGHV3-11P01762 117 aa18.9■□□□□ 0.62
SCN1B-201ENST00000262631 IGHV3-23P01764 117 aa18.9■□□□□ 0.62
SCN1B-201ENST00000262631 EWSR1Q01844 656 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCN1B-201ENST00000262631 NHLH2Q02577 135 aa18.9■□□□□ 0.62
SCN1B-201ENST00000262631 C18orf65Q6ZTR6 163 aa18.9■□□□□ 0.62
SCN1B-201ENST00000262631 TMEM217Q8N7C4 229 aa18.9■□□□□ 0.62
SCN1B-201ENST00000262631 ZNF491Q8N8L2 437 aa18.9■□□□□ 0.62
SCN1B-201ENST00000262631 BSCL2Q96G97 398 aaPredicted RBP18.9■□□□□ 0.62
SCN1B-201ENST00000262631 COL6A5A8TX70 2615 aa18.89■□□□□ 0.61
SCN1B-201ENST00000262631 RPL12P30050 165 aaKnown RBP18.89■□□□□ 0.61
SCN1B-201ENST00000262631 ATP5G2Q06055 141 aa18.89■□□□□ 0.61
SCN1B-201ENST00000262631 EXOSC2Q13868 293 aaKnown RBP18.89■□□□□ 0.61
SCN1B-201ENST00000262631 ZNF546Q86UE3 836 aa18.89■□□□□ 0.61
SCN1B-201ENST00000262631 USMG5Q96IX5 58 aa18.89■□□□□ 0.61
SCN1B-201ENST00000262631 SULT1A1P50225 295 aa18.89■□□□□ 0.61
SCN1B-201ENST00000262631 KHDC1LQ5JSQ8 128 aa18.89■□□□□ 0.61
SCN1B-201ENST00000262631 OR5B12Q96R08 314 aa18.89■□□□□ 0.61
SCN1B-201ENST00000262631 GNB4Q9HAV0 340 aa18.89■□□□□ 0.61
SCN1B-201ENST00000262631 TCRBV4S1A1TA0A5B7 111 aa18.88■□□□□ 0.61
SCN1B-201ENST00000262631 CD69Q07108 199 aa18.88■□□□□ 0.61
SCN1B-201ENST00000262631 ACOT7LQ6ZUV0 252 aa18.88■□□□□ 0.61
SCN1B-201ENST00000262631 UBE2E2Q96LR5 201 aa18.88■□□□□ 0.61
SCN1B-201ENST00000262631 SLC25A31Q9H0C2 315 aa18.88■□□□□ 0.61
SCN1B-201ENST00000262631 TNFSF18Q9UNG2 199 aa18.88■□□□□ 0.61
SCN1B-201ENST00000262631 A0A0G2JLM5 398 aa18.87■□□□□ 0.61
SCN1B-201ENST00000262631 STX12Q86Y82 276 aa18.87■□□□□ 0.61
SCN1B-201ENST00000262631 OR10P1Q8NGE3 313 aa18.87■□□□□ 0.61
SCN1B-201ENST00000262631 CCDC140Q96MF4 163 aa18.87■□□□□ 0.61
SCN1B-201ENST00000262631 RNF222A6NCQ9 220 aa18.86■□□□□ 0.61
SCN1B-201ENST00000262631 F8W735 103 aaPredicted RBP18.86■□□□□ 0.61
SCN1B-201ENST00000262631 ARPC5O15511 151 aa18.86■□□□□ 0.61
SCN1B-201ENST00000262631 SLC16A13Q7RTY0 426 aa18.86■□□□□ 0.61
SCN1B-201ENST00000262631 ZNF502Q8TBZ5 544 aa18.86■□□□□ 0.61
SCN1B-201ENST00000262631 VN1R17PQ8TDU5 208 aa18.86■□□□□ 0.61
SCN1B-201ENST00000262631 CXorf58Q96LI9 332 aa18.86■□□□□ 0.61
SCN1B-201ENST00000262631 A0A1W2PRX2 142 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 AQP10Q96PS8 301 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 MDFIQ99750 246 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 C21orf62Q9NYP8 219 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 TRBV12-3P01733 135 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 CDX1P47902 265 aaPredicted RBP18.85■□□□□ 0.61
SCN1B-201ENST00000262631 SLC38A11Q08AI6 406 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 GAMTQ14353 236 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 TOR2AQ5JU69 321 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 EEF1AKMT3Q96AZ1 226 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 CITED1Q99966 193 aa18.85■□□□□ 0.61
SCN1B-201ENST00000262631 RPS10-NUDT3A0A1W2PQS6 291 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 ADARB2-AS1A8MUL3 147 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 GPX4P36969 197 aaPredicted RBP18.84■□□□□ 0.61
SCN1B-201ENST00000262631 BAXQ07812 192 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 ZNF343Q6P1L6 599 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 ACSM6Q6P461 480 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 TEX261Q6UWH6 196 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 UBAC2Q8NBM4 344 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 LRRC20Q8TCA0 184 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 CACNG8Q8WXS5 425 aa18.84■□□□□ 0.61
SCN1B-201ENST00000262631 TSSC4Q9Y5U2 329 aaPredicted RBP18.84■□□□□ 0.61
SCN1B-201ENST00000262631 IFNA7P01567 189 aa18.83■□□□□ 0.61
SCN1B-201ENST00000262631 INO80EQ8NBZ0 244 aaPredicted RBP18.83■□□□□ 0.61
SCN1B-201ENST00000262631 OR5C1Q8NGR4 320 aa18.83■□□□□ 0.61
SCN1B-201ENST00000262631 ACY3Q96HD9 319 aa18.83■□□□□ 0.61
SCN1B-201ENST00000262631 ZC4H2Q9NQZ6 224 aa18.83■□□□□ 0.61
SCN1B-201ENST00000262631 RND2P52198 227 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 ETFRF1Q6IPR1 90 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 CLEC19AQ6UXS0 136 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 SLC51BQ86UW2 128 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 KLHL30-AS1Q8NEE0 82 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 NPIPB3Q92617 1050 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 TRBV7-1A0A0A6YYK4 115 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 HMSDA8MTL9 139 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 I3L521 148 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 S100A11P31949 105 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 GPR183P32249 361 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 MFAP4P55083 255 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 HBG1P69891 147 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 HBG2P69892 147 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 CLINT1Q14677 625 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 TMEM116Q8NCL8 245 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 C4orf3Q8WVX3 66 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 SMIM3Q9BZL3 60 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 MFFQ9GZY8 342 aa18.82■□□□□ 0.6
SCN1B-201ENST00000262631 OR2T8A6NH00 312 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 CLEC3BP05452 202 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 LGALS1P09382 135 aaKnown RBP18.81■□□□□ 0.6
SCN1B-201ENST00000262631 NUP62P37198 522 aaPredicted RBP18.81■□□□□ 0.6
SCN1B-201ENST00000262631 DLK1P80370 383 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 DEFB136Q30KP8 78 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 Q56UQ5 140 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 CLLU1Q5K131 121 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 LILRB2Q8N423 598 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 ZNF680Q8NEM1 530 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 OR4X1Q8NH49 305 aa18.81■□□□□ 0.6
SCN1B-201ENST00000262631 STAB1Q9NY15 2570 aa18.8■□□□□ 0.6
SCN1B-201ENST00000262631 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.8■□□□□ 0.6
SCN1B-201ENST00000262631 C4BPBP20851 252 aa18.8■□□□□ 0.6
SCN1B-201ENST00000262631 C12orf54Q6X4T0 127 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms