RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 LINC01560Q8TB33 94 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 FAM117AQ9C073 453 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 RAB1BQ9H0U4 201 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 SMDT1Q9H4I9 107 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 PRDM6Q9NQX0 595 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 XIRP1Q702N8 1843 aaKnown RBP6.3□□□□□ -1.4
RIF1-201ENST00000243326 LOC390937A0A1W2PQ73 354 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 MT-ND6P03923 174 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 HOXC4P09017 264 aaPredicted RBP6.3□□□□□ -1.4
RIF1-201ENST00000243326 CYYR1Q96J86 154 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 PLXNA1Q9UIW2 1896 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 CCL3L1P16619 93 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 VKORC1Q9BQB6 163 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 SF3B5Q9BWJ5 86 aaKnown RBP6.3□□□□□ -1.4
RIF1-201ENST00000243326 IGHV3-73A0A0B4J1V6 119 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 OR11H12B2RN74 326 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 COX6A1P12074 109 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 TRIP6Q15654 476 aaKnown RBP6.3□□□□□ -1.4
RIF1-201ENST00000243326 C10orf55Q5SWW7 151 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 OR11H1Q8NG94 326 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 OR11H2Q8NH07 326 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 COL4A6Q14031 1691 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 PRB1P04280 392 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 TMEM54Q969K7 222 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 LINC00479Q96M42 142 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 Q9H3A6 140 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 LINC00527Q9UJ94 153 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 ZNRD1Q9P1U0 126 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 RPUSD1Q9UJJ7 312 aaKnown RBP6.3□□□□□ -1.4
RIF1-201ENST00000243326 OR4A5Q8NH83 315 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 RAB1CQ92928 201 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 J3QRE1 110 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 FOXG1P55316 489 aaPredicted RBP6.3□□□□□ -1.4
RIF1-201ENST00000243326 CD5P06127 495 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 EXOC3-AS1Q8N2X6 119 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 PINLYPA6NC86 204 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 INO80CQ6PI98 192 aaPredicted RBP6.3□□□□□ -1.4
RIF1-201ENST00000243326 IFI27L2Q9H2X8 130 aa6.3□□□□□ -1.4
RIF1-201ENST00000243326 WISP1O95388 367 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 TMEM56-RWDD3S4R434 201 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 IGKV1-27A0A075B6S5 117 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 LILRA1O75019 489 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 ZBTB34Q8NCN2 500 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 IZUMO1RA6ND01 250 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 WIPF3A6NGB9 483 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 C10orf35Q96D05 121 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 HS3ST6Q96QI5 342 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 SYNGR3O43761 229 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 MPDU1O75352 247 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 DOCK4Q8N1I0 1966 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 MGST3O14880 152 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 TMEM238LA0A1B0GVL6 79 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 A6NJY4 79 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 IGFBP3P17936 291 aaPredicted RBP6.29□□□□□ -1.4
RIF1-201ENST00000243326 TMEM262E9PQX1 116 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 F2Z2F3 143 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 POLR3KQ9Y2Y1 108 aaPredicted RBP6.29□□□□□ -1.4
RIF1-201ENST00000243326 SIGMAR1Q99720 223 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 DLEU1O43261 78 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 KMT2EQ8IZD2 1858 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 K7EMI3 77 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
RIF1-201ENST00000243326 NAV2Q8IVL1 2488 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 C1orf210Q8IVY1 113 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 RS1O15537 224 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 LINC00596Q86U02 117 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 ZC2HC1AQ96GY0 325 aa6.29□□□□□ -1.4
RIF1-201ENST00000243326 MST1LQ2TV78 715 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 NBEAP1P0C6P0 100 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 ZNF474Q6S9Z5 364 aaPredicted RBP6.28□□□□□ -1.4
RIF1-201ENST00000243326 NFAM1Q8NET5 270 aaPredicted RBP6.28□□□□□ -1.4
RIF1-201ENST00000243326 GBF1Q92538 1859 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 RPL15P61313 204 aaKnown RBP6.28□□□□□ -1.4
RIF1-201ENST00000243326 TMEM106BQ9NUM4 274 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 SAA2-SAA4A0A096LPE2 208 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 A0A0G2JLM5 398 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 SAA2P0DJI9 122 aaPredicted RBP6.28□□□□□ -1.4
RIF1-201ENST00000243326 TTC9CQ8N5M4 171 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 SCN10AQ9Y5Y9 1956 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 FTH1P19P0C7X4 201 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 ZNF585BQ52M93 769 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 DUX5Q96PT3 197 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 LRTM2Q8N967 370 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 IGFBPL1Q8WX77 278 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 A0A0G2JRQ6 117 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 C3orf79P0CE67 100 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 DNASE2BQ8WZ79 361 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 FBXL7Q9UJT9 491 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 TDGF1P3P51864 188 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 A0A087WWC5 75 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 A0A1W2PQM1 296 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 SUMO2P61956 95 aaKnown RBP6.28□□□□□ -1.4
RIF1-201ENST00000243326 CIARTQ8N365 385 aaPredicted RBP6.28□□□□□ -1.4
RIF1-201ENST00000243326 GCSAMQ8N6F7 178 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 LINC00477Q96M19 166 aa6.28□□□□□ -1.4
RIF1-201ENST00000243326 ZNF146Q15072 292 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms