RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 TPRA1Q86W33 373 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF695Q8IW36 515 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 TCTEX1D1Q8N7M0 179 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR4A4PQ8NGN8 299 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 UBALD1Q8TB05 177 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 FCGR1BQ92637 280 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 TMEM203Q969S6 136 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ARHGAP5-AS1Q96IT6 56 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 CYYR1Q96J86 154 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 UBE2E2Q96LR5 201 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 CNBD2Q96M20 576 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 NOL4LQ96MY1 436 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 RASL11BQ9BPW5 248 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 CMSS1Q9BQ75 279 aaKnown RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 PECRQ9BY49 303 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 CCDC90BQ9GZT6 254 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 C12orf4Q9NQ89 552 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZMAT5Q9UDW3 170 aaKnown RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 AK6Q9Y3D8 172 aaKnown RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRBV6-7A0A0A0MS04 114 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 IGKV1-6A0A0C4DH72 117 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 METTL21EPA6NDL7 271 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 TRDCB7Z8K6 153 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 H0YJW9 148 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 MFNGO00587 321 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 RAMP3O60896 148 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 SCGNO76038 276 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 BRI3O95415 125 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 SCTP09683 121 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 CT45A6P0DMU7 189 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 CT45A5P0DMU8 189 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 CT45A7P0DMV0 189 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 IGLL1P15814 213 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 HIST1H1DP16402 221 aaKnown RBP2.58□□□□□ -2
CKS1BP3-201ENST00000600888 DTYMKP23919 212 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 GADD45AP24522 165 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 MYL9P24844 172 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 CEACAM6P40199 344 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 MAP2K4P45985 399 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 LGALS7P47929 136 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 CLDN12P56749 244 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 PITPNAQ00169 270 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 NDPQ00604 133 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 MMDQ15546 238 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 AKIRIN2Q53H80 203 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 HES5Q5TA89 166 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF562Q6V9R5 426 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 PDPNQ86YL7 162 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 MINDY2Q8NBR6 621 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 OR10R2Q8NGX6 335 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 OR8U1Q8NH10 309 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 C4orf3Q8WVX3 66 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 IL1F10Q8WWZ1 152 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 ABHD14BQ96IU4 210 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 KCTD7Q96MP8 289 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 HSPB9Q9BQS6 159 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 MRPL20Q9BYC9 149 aaKnown RBP2.58□□□□□ -2
CKS1BP3-201ENST00000600888 PARP12Q9H0J9 701 aaKnown RBP2.58□□□□□ -2
CKS1BP3-201ENST00000600888 DCSTAMPQ9H295 470 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 OR51J1Q9H342 316 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 Q9H521 79 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 TXNL4BQ9NX01 149 aaKnown RBP2.58□□□□□ -2
CKS1BP3-201ENST00000600888 AK3Q9UIJ7 227 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 WASHC3Q9Y3C0 194 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 NUBP2Q9Y5Y2 271 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 STAB2Q8WWQ8 2551 aa2.58□□□□□ -2
CKS1BP3-201ENST00000600888 A0A0A6YYH2 397 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 TRAV41A0A0B4J266 112 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 A6NJ64 397 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 H3BUA1 57 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 I3L521 148 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 K7EIL1 84 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 ARPC1BO15143 372 aaKnown RBP2.57□□□□□ -2
CKS1BP3-201ENST00000600888 FABP7O15540 132 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 ATP6V1G1O75348 118 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 SLC22A5O76082 557 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 APOA2P02652 100 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 CRYGBP07316 175 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 CD3GP09693 182 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 CTXN2P0C2S0 81 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 RRASP10301 218 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 PGAM2P15259 253 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 VDAC1P21796 283 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 CNTFRP26992 372 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 MEOX2P50222 304 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 RAB9AP51151 201 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 INSL3P51460 131 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 OR10A3P58181 314 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 LYZP61626 148 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 MRPS15P82914 257 aaKnown RBP2.57□□□□□ -2
CKS1BP3-201ENST00000600888 TMEM267Q0VDI3 215 aaPredicted RBP2.57□□□□□ -2
CKS1BP3-201ENST00000600888 PSG5Q15238 335 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 MSMO1Q15800 293 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 KCTD21Q4G0X4 260 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 RPL39P5Q59GN2 51 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 HACD4Q5VWC8 232 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 C22orf42Q6IC83 251 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 PYHIN1Q6K0P9 492 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF773Q6PK81 442 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms