RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 CXCL1P09341 107 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 IGKV1-13P0DP09 117 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 HSD52Q0P140 79 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 OR5AN1Q8NGI8 311 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 FGF11Q92914 225 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 MS4A6AQ9H2W1 248 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 SAA2-SAA4A0A096LPE2 208 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 A0A0A6YYD4 124 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 SAA2P0DJI9 122 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 SEC11AP67812 179 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 ZNF585BQ52M93 769 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 CENPVQ7Z7K6 275 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 GLRX5Q86SX6 157 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 GFI1Q99684 422 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 LINC00312Q9Y6C7 94 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 TGFBR3LH3BV60 316 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 CECR9P0C854 216 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 STARD6P59095 220 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 ASCL2Q99929 193 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 YPEL1O60688 119 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 LYPD3O95274 346 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 PAX2Q02962 417 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 STPG1Q5TH74 334 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 PPP1R32Q7Z5V6 425 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 YPEL2Q96QA6 119 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 CCL19Q99731 98 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 FAM71F2Q6NXP2 309 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 OCC1Q8TAD7 63 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 C11orf68Q9H3H3 251 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 A0A1W2PRS3 328 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 TCRBV4S1A1TA0A5B7 111 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 ERVK11-1P61568 191 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 PVRIGQ6DKI7 326 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 DPM3Q9P2X0 92 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 IGHV3-49A0A0A0MS15 119 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 IGHV2OR16-5A0A0B4J2B6 119 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 NXT2Q9NPJ8 142 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-217ENST00000581241 IGHV3OR16-10A0A075B7F0 116 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 FABP5P3A8MUU1 101 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 AMBPP02760 352 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 CD55P08174 381 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 ATP1A1-AS1Q5TC04 95 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 FAM216BQ8N7L0 139 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 VSIRQ9H7M9 311 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 MRPS18CQ9Y3D5 142 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 RAMP3O60896 148 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 OR2K2Q8NGT1 345 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 TSKUQ8WUA8 353 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 SIGLEC12Q96PQ1 595 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 RALGAPA2Q2PPJ7 1873 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 SRSF7Q16629 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 ACTL10Q5JWF8 245 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 LDLRAD2Q5SZI1 272 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 TEX38Q6PEX7 206 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 FAM89BQ8N5H3 189 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 DMRTA2Q96SC8 542 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 SCN8AQ9UQD0 1980 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 NUTF2P61970 127 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 REG4Q9BYZ8 158 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 CYTL1Q9NRR1 136 aa12.16□□□□□ -0.46
CSNK1D-217ENST00000581241 TRBV24-1A0A075B6N3 115 aa12.15□□□□□ -0.46
CSNK1D-217ENST00000581241 SLC50A1Q9BRV3 221 aa12.15□□□□□ -0.46
CSNK1D-217ENST00000581241 A0A1W2PR77 199 aa12.15□□□□□ -0.46
CSNK1D-217ENST00000581241 CELA3AP09093 270 aa12.15□□□□□ -0.46
CSNK1D-217ENST00000581241 PSME4Q14997 1843 aa12.15□□□□□ -0.46
CSNK1D-217ENST00000581241 A0A0G2JLM5 398 aa12.15□□□□□ -0.46
CSNK1D-217ENST00000581241 EFNB3Q15768 340 aa12.15□□□□□ -0.46
CSNK1D-217ENST00000581241 NEUROG3Q9Y4Z2 214 aa12.15□□□□□ -0.46
CSNK1D-217ENST00000581241 IGHV1-2P23083 117 aa12.15□□□□□ -0.47
CSNK1D-217ENST00000581241 IFI27P40305 119 aaPredicted RBP12.15□□□□□ -0.47
CSNK1D-217ENST00000581241 ID3Q02535 119 aa12.15□□□□□ -0.47
CSNK1D-217ENST00000581241 DEPPQ9NTK1 212 aa12.15□□□□□ -0.47
CSNK1D-217ENST00000581241 ORMDL2Q53FV1 153 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 FAM201AQ5SY85 155 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 GFI1BQ5VTD9 330 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 PPBPP02775 128 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 OR9G9P0C7N8 305 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 MORN2Q502X0 79 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 CFAP161Q6P656 301 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 PSG7Q13046 419 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 C1orf194Q5T5A4 169 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 LTBP4Q8N2S1 1624 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 NUP214P35658 2090 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 A8MWV9 139 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 PYYP10082 97 aa12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 PAQR4Q8N4S7 273 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-217ENST00000581241 A0A0G2JMM0 328 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 A0A1W2PPB8 328 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 KIR3DP1A8MWS1 328 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 RNF182Q8N6D2 247 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 A0A087WV48 116 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 EFEMP2O95967 443 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 GAGE13Q4V321 117 aa12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 GTF3AQ92664 365 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-217ENST00000581241 IGKV1-9A0A0C4DH69 117 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 488.7 ms