RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 IFNA4P05014 189 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 CTRB1P17538 263 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 C2orf83Q53S99 150 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 RPL7L1Q6DKI1 246 aaKnown RBP18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 CTRB2Q6GPI1 263 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 ZNF114Q8NC26 417 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 OR5T1Q8NG75 326 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 NOL4LQ96MY1 436 aaPredicted RBP18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 PRSS22Q9GZN4 317 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 ZNF702PQ9H963 129 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 PMS2P5A8MQ11 134 aa18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 MFAP2P55001 183 aa18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 RAB11AP62491 216 aa18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 BAXQ07812 192 aa18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 ETV3LQ6ZN32 361 aa18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 TAF15Q92804 592 aaKnown RBP eCLIP18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 CXorf58Q96LI9 332 aa18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 SLC25A32Q9H2D1 315 aa18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 F11RQ9Y624 299 aaKnown RBP18.9■□□□□ 0.62
ATPAF1-213ENST00000574428 TRAV41A0A0B4J266 112 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 NPIPB5A8MRT5 1133 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 FBXO24O75426 580 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 PRH1P02810 166 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 IGF1P05019 195 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 RNASE1P07998 156 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 SUB1P53999 127 aaKnown RBP eCLIP18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 COMMD7Q86VX2 200 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 TTC9CQ8N5M4 171 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 FAM210AQ96ND0 272 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 WNT10AQ9GZT5 417 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 DMRT1Q9Y5R6 373 aa18.89■□□□□ 0.61
ATPAF1-213ENST00000574428 DEFA4P12838 97 aa18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 AKIRIN2Q53H80 203 aa18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 ARSJQ5FYB0 599 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 OR5C1Q8NGR4 320 aa18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 OR1P1Q8NH06 330 aa18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 ANKRD34BA5PLL1 514 aa18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 AP4M1O00189 453 aa18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 CRYGCP07315 174 aa18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 CRIP2P52943 208 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 CLINT1Q14677 625 aa18.88■□□□□ 0.61
ATPAF1-213ENST00000574428 ATP5IP56385 69 aaPredicted RBP18.87■□□□□ 0.61
ATPAF1-213ENST00000574428 SLC38A11Q08AI6 406 aa18.87■□□□□ 0.61
ATPAF1-213ENST00000574428 C19orf54Q5BKX5 351 aa18.87■□□□□ 0.61
ATPAF1-213ENST00000574428 OR10P1Q8NGE3 313 aa18.87■□□□□ 0.61
ATPAF1-213ENST00000574428 JMJD8Q96S16 334 aa18.87■□□□□ 0.61
ATPAF1-213ENST00000574428 WFDC1Q9HC57 220 aa18.87■□□□□ 0.61
ATPAF1-213ENST00000574428 HBG1P69891 147 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 HBG2P69892 147 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 OR1S2Q8NGQ3 325 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 FAM110DQ8TAY7 271 aaPredicted RBP18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 TMED6Q8WW62 240 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 MISP3Q96FF7 219 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 PRSS46E5RG02 174 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 EIF5AP63241 154 aaKnown RBP18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 SLC25A24Q6NUK1 477 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 STPG2Q8N412 459 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 LILRB2Q8N423 598 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 TMEM68Q96MH6 324 aa18.86■□□□□ 0.61
ATPAF1-213ENST00000574428 SOX15O60248 233 aa18.85■□□□□ 0.61
ATPAF1-213ENST00000574428 JTBO76095 146 aa18.85■□□□□ 0.61
ATPAF1-213ENST00000574428 PINX1Q96BK5 328 aaKnown RBP18.85■□□□□ 0.61
ATPAF1-213ENST00000574428 TCF21O43680 179 aa18.84■□□□□ 0.61
ATPAF1-213ENST00000574428 PVRIGQ6DKI7 326 aa18.84■□□□□ 0.61
ATPAF1-213ENST00000574428 Q8N2B8 174 aa18.84■□□□□ 0.61
ATPAF1-213ENST00000574428 RNASEH2CQ8TDP1 164 aaKnown RBP18.83■□□□□ 0.61
ATPAF1-213ENST00000574428 FANCD2OSQ96PS1 177 aa18.83■□□□□ 0.61
ATPAF1-213ENST00000574428 MED9Q9NWA0 146 aa18.83■□□□□ 0.61
ATPAF1-213ENST00000574428 OPRK1P41145 380 aa18.83■□□□□ 0.6
ATPAF1-213ENST00000574428 SRSF2Q01130 221 aaKnown RBP18.83■□□□□ 0.6
ATPAF1-213ENST00000574428 DEFA5Q01523 94 aa18.83■□□□□ 0.6
ATPAF1-213ENST00000574428 MLANAQ16655 118 aa18.83■□□□□ 0.6
ATPAF1-213ENST00000574428 Q6ZSV7 163 aa18.83■□□□□ 0.6
ATPAF1-213ENST00000574428 UBAC2Q8NBM4 344 aa18.83■□□□□ 0.6
ATPAF1-213ENST00000574428 ZNF355PQ9NSJ1 428 aa18.83■□□□□ 0.6
ATPAF1-213ENST00000574428 IGLV11-55A0A075B6I3 123 aa18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 IGHV3-21A0A0B4J1V1 117 aa18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 IGHV3-48P01763 117 aa18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 CRYBA1P05813 215 aa18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 ATP5SQ99766 215 aa18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 ARV1Q9H2C2 271 aa18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 FNDC4Q9H6D8 234 aaPredicted RBP18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 ZNF580Q9UK33 172 aa18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 NF1P21359 2839 aa18.82■□□□□ 0.6
ATPAF1-213ENST00000574428 BORCS7-ASMTA0A0B4J1R7 106 aa18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 SCAF4O95104 1147 aaKnown RBP18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 PPIFP30405 207 aaKnown RBP18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 OR1L6Q8NGR2 347 aa18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 TEP1Q99973 2627 aaKnown RBP18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 RPL15P61313 204 aaKnown RBP18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 CFHR3Q02985 330 aa18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 CD69Q07108 199 aa18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 MS4A10Q96PG2 267 aa18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 PFDN2Q9UHV9 154 aa18.81■□□□□ 0.6
ATPAF1-213ENST00000574428 TEX46H3BTG2 121 aa18.8■□□□□ 0.6
ATPAF1-213ENST00000574428 CORTO00230 105 aa18.8■□□□□ 0.6
ATPAF1-213ENST00000574428 OR2J3O76001 311 aa18.8■□□□□ 0.6
ATPAF1-213ENST00000574428 SLC16A13Q7RTY0 426 aa18.8■□□□□ 0.6
ATPAF1-213ENST00000574428 ZNF329Q86UD4 541 aa18.8■□□□□ 0.6
ATPAF1-213ENST00000574428 OR2T6Q8NHC8 308 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms