RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.54
RAB40B-203ENST00000570676 POLR2GP62487 172 aaKnown RBP eCLIP11.65□□□□□ -0.54
RAB40B-203ENST00000570676 RAB32Q13637 225 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 AKIRIN2Q53H80 203 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 UNQ5815/PRO19632Q6UWF5 114 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 AKAP14Q86UN6 197 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 LFNGQ8NES3 379 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 OR10W1Q8NGF6 305 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 PPP1R1CQ8WVI7 109 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 PLEKHA3Q9HB20 300 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 RANGRFQ9HD47 186 aaPredicted RBP11.65□□□□□ -0.54
RAB40B-203ENST00000570676 ENY2Q9NPA8 101 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 LSM4Q9Y4Z0 139 aaKnown RBP11.65□□□□□ -0.54
RAB40B-203ENST00000570676 TEX22C9J3V5 150 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 K7EPK0 472 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 SYNGR2O43760 224 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 SSSCA1O60232 199 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 APELAP0DMC3 54 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 PSMB6P28072 239 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 SLURP1P55000 103 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 CD69Q07108 199 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 TMEM267Q0VDI3 215 aaPredicted RBP11.64□□□□□ -0.55
RAB40B-203ENST00000570676 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 DCUN1D4Q92564 292 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
RAB40B-203ENST00000570676 TNCP24821 2201 aa11.64□□□□□ -0.55
RAB40B-203ENST00000570676 IGHV4OR15-8A0A075B7B6 117 aa11.63□□□□□ -0.55
RAB40B-203ENST00000570676 A0A087WW49 117 aa11.63□□□□□ -0.55
RAB40B-203ENST00000570676 IGLC7A0M8Q6 106 aa11.63□□□□□ -0.55
RAB40B-203ENST00000570676 LINC01619G3V211 115 aa11.63□□□□□ -0.55
RAB40B-203ENST00000570676 OVOL1O14753 267 aa11.63□□□□□ -0.55
RAB40B-203ENST00000570676 IAPPP10997 89 aa11.63□□□□□ -0.55
RAB40B-203ENST00000570676 OR2T35Q8NGX2 323 aa11.63□□□□□ -0.55
RAB40B-203ENST00000570676 DLX4Q92988 240 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-203ENST00000570676 ST6GAL2Q96JF0 529 aa11.63□□□□□ -0.55
RAB40B-203ENST00000570676 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
RAB40B-203ENST00000570676 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-203ENST00000570676 MPC2O95563 127 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 RLN2P04090 185 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 OR13C7P0DN81 318 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 AREGP15514 252 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 INSL3P51460 131 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 TPPP2P59282 170 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 WT1-ASQ06250 92 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 HSD17B13Q7Z5P4 300 aaPredicted RBP11.62□□□□□ -0.55
RAB40B-203ENST00000570676 MS4A10Q96PG2 267 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
RAB40B-203ENST00000570676 RAB40CQ96S21 281 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 HIPK2Q9H2X6 1198 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 SLA2Q9H6Q3 261 aa11.62□□□□□ -0.55
RAB40B-203ENST00000570676 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
RAB40B-203ENST00000570676 COL7A1Q02388 2944 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 TRAV14DV4A0A0A6YYC5 116 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 L7N2F9 121 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 DEDDO75618 318 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 REG1AP05451 166 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 PET100P0DJ07 73 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 PVALBP20472 110 aaPredicted RBP11.61□□□□□ -0.55
RAB40B-203ENST00000570676 VAMP2P63027 116 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 ERHP84090 104 aaKnown RBP11.61□□□□□ -0.55
RAB40B-203ENST00000570676 FGL1Q08830 312 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 Q5BKY6 102 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 OR5AC2Q9NZP5 309 aa11.61□□□□□ -0.55
RAB40B-203ENST00000570676 INS-IGF2F8WCM5 200 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 H0YIZ8 118 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 H3BUA1 57 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 LY86O95711 162 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 TRGV3P03979 118 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 SNCAP37840 140 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 PRSS54Q6PEW0 395 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 TCTE3Q8IZS6 198 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 OR2C3Q8N628 320 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 OR5T1Q8NG75 326 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 THAP6Q8TBB0 222 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 SMIM8Q96KF7 97 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 TMEM68Q96MH6 324 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 NEURL2Q9BR09 285 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 RNF126Q9BV68 326 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 PSENENQ9NZ42 101 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 MBD2Q9UBB5 411 aa11.6□□□□□ -0.55
RAB40B-203ENST00000570676 NPIPB5A8MRT5 1133 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 E5RGE8 158 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 H3BP45 60 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 PFDN1O60925 122 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 SAP30O75446 220 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 TMEM50AO95807 157 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 IFNA10P01566 189 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 HSPB1P04792 205 aaKnown RBP11.59□□□□□ -0.55
RAB40B-203ENST00000570676 PAX9P55771 341 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 SPANXN5Q5MJ07 72 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 ACSM6Q6P461 480 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 TTC9CQ8N5M4 171 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 SLC24A4Q8NFF2 622 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 C11orf1Q9H5F2 150 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 SORL1Q92673 2214 aa11.59□□□□□ -0.55
RAB40B-203ENST00000570676 G3V3Q6 166 aa11.58□□□□□ -0.56
RAB40B-203ENST00000570676 BRI3O95415 125 aa11.58□□□□□ -0.56
RAB40B-203ENST00000570676 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms