RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 LINC00854A0A1B0GVQ3 168 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 TMEM213A2RRL7 107 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 IZUMO1RA6ND01 250 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 MT-CO2P00403 227 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 IGHV3-48P01763 117 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 VAMP1P23763 118 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 SPCS3P61009 180 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 SRPXP78539 464 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 RBMS2Q15434 407 aaKnown RBP12.23□□□□□ -0.45
COMMD4-206ENST00000562610 CD300EQ496F6 205 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-206ENST00000562610 SPSB3Q6PJ21 355 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 UNQ9165/PRO28630Q6UXU0 137 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 ADAMTSL5Q6ZMM2 481 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 GTSCR1Q86UQ5 136 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 OR2K2Q8NGT1 345 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 CHRDL1Q9BU40 450 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 PALMDQ9NP74 551 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 SELENOKQ9Y6D0 94 aa12.23□□□□□ -0.45
COMMD4-206ENST00000562610 F8W735 103 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-206ENST00000562610 INS-IGF2F8WCM5 200 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 I3L2K1 104 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 SULT1A3P0DMM9 295 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 SULT1A4P0DMN0 295 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 CBLN1P23435 193 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 CCR6P51684 374 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 SUB1P53999 127 aaKnown RBP eCLIP12.22□□□□□ -0.45
COMMD4-206ENST00000562610 MFAP4P55083 255 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 TMEM128Q5BJH2 165 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 C11orf87Q6NUJ2 197 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 LGI3Q8N145 548 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 CENPSQ8N2Z9 138 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 TMEM190Q8WZ59 177 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 ATP6V0BQ99437 205 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 ZNF436Q9C0F3 470 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-206ENST00000562610 GAR1Q9NY12 217 aaKnown RBP12.22□□□□□ -0.45
COMMD4-206ENST00000562610 UFC1Q9Y3C8 167 aa12.22□□□□□ -0.45
COMMD4-206ENST00000562610 A0A0B4J2A0 478 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 CEBPZOSA8MTT3 80 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 NUPL2O15504 423 aaKnown RBP12.21□□□□□ -0.45
COMMD4-206ENST00000562610 GNG7O60262 68 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.45
COMMD4-206ENST00000562610 AARDQ4LEZ3 155 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 TM4SF20Q53R12 229 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 LYZL2Q7Z4W2 148 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 OR52E5Q8NH55 327 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 SDHCQ99643 169 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-206ENST00000562610 ASCL2Q99929 193 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 C20orf24Q9BUV8 137 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 HEYLQ9NQ87 328 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-206ENST00000562610 TECRQ9NZ01 308 aaKnown RBP12.21□□□□□ -0.45
COMMD4-206ENST00000562610 SHPKQ9UHJ6 478 aa12.21□□□□□ -0.45
COMMD4-206ENST00000562610 DNAH9Q9NYC9 4486 aa12.21□□□□□ -0.46
COMMD4-206ENST00000562610 IGHV3OR16-8A0A075B7F1 116 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 NAP1L6A6NFF2 107 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 CENPXA8MT69 81 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 CORTO00230 105 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 NDUFA4O00483 81 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 IL7P13232 177 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 ADMP35318 185 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 OPRK1P41145 380 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 GUCA2BQ16661 112 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 DEFB114Q30KQ6 69 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 NMSQ5H8A3 153 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 BTNL8Q6UX41 500 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 MLXQ9UH92 298 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 COL7A1Q02388 2944 aa12.2□□□□□ -0.46
COMMD4-206ENST00000562610 PIGBOS1A0A0B4J2F0 54 aa12.19□□□□□ -0.46
COMMD4-206ENST00000562610 FRMD6-AS1P0C7T7 363 aa12.19□□□□□ -0.46
COMMD4-206ENST00000562610 ELLP55199 621 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-206ENST00000562610 RELQ04864 619 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-206ENST00000562610 PPP1R1AQ13522 171 aa12.19□□□□□ -0.46
COMMD4-206ENST00000562610 SMCO1Q147U7 214 aa12.19□□□□□ -0.46
COMMD4-206ENST00000562610 MARC2Q969Z3 335 aa12.19□□□□□ -0.46
COMMD4-206ENST00000562610 WDR89Q96FK6 387 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-206ENST00000562610 TXN2Q99757 166 aa12.19□□□□□ -0.46
COMMD4-206ENST00000562610 DAZ1Q9NQZ3 744 aaKnown RBP12.19□□□□□ -0.46
COMMD4-206ENST00000562610 DUXBA0A1W2PPF3 345 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 ZNF207O43670 478 aaKnown RBP12.18□□□□□ -0.46
COMMD4-206ENST00000562610 NDUFB6O95139 128 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 CTSGP08311 255 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 IGHV4-30-4P0DP06 118 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 FCGR2BP31994 310 aaPredicted RBP12.18□□□□□ -0.46
COMMD4-206ENST00000562610 HTR2BP41595 481 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 CD81P60033 236 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 ANKRD55Q3KP44 614 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 Q8N1Y9 231 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 DUSP18Q8NEJ0 188 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 SLC24A4Q8NFF2 622 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 OR1S1Q8NH92 325 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 HIPK2Q9H2X6 1198 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 MRPL27Q9P0M9 148 aaKnown RBP12.18□□□□□ -0.46
COMMD4-206ENST00000562610 CACFD1Q9UGQ2 172 aa12.18□□□□□ -0.46
COMMD4-206ENST00000562610 YIF1AO95070 293 aa12.17□□□□□ -0.46
COMMD4-206ENST00000562610 SFT2D2O95562 160 aa12.17□□□□□ -0.46
COMMD4-206ENST00000562610 NPBWR1P48145 328 aa12.17□□□□□ -0.46
COMMD4-206ENST00000562610 BSXQ3C1V8 233 aa12.17□□□□□ -0.46
COMMD4-206ENST00000562610 C7orf50Q9BRJ6 194 aaKnown RBP12.17□□□□□ -0.46
COMMD4-206ENST00000562610 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms