RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	CDRT1	O95170	752 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	CPSF4	O95639	269 aa	Known RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	PTH	P01270	115 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	IFNA17	P01571	189 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431		P01737	135 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	CD55	P08174	381 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	SNRPC	P09234	159 aa	Known RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	OR12D1	P0DN82	309 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	DDT	P30046	118 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	GLRX	P35754	106 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	MYCNOS	P40205	109 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	CTRL	P40313	264 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	P2RX1	P51575	399 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	MTPN	P58546	118 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	PKIA	P61925	76 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	ZNF239	Q16600	458 aa	Known RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	NRF1	Q16656	503 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	LTC4S	Q16873	150 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	OCIAD2	Q56VL3	154 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	AVPI1	Q5T686	147 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	ZNF57	Q68EA5	555 aa	Predicted RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	GOLT1A	Q6ZVE7	132 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	ZNF550	Q7Z398	422 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	HMGN2P46	Q86SG4	172 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	MSRB3	Q8IXL7	192 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	BAP18	Q8IXM2	172 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	C10orf111	Q8N326	155 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	CBR4	Q8N4T8	237 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	FAM24B	Q8N5W8	94 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	OR5W2	Q8NH69	310 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	OR10D3	Q8NH80	312 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	OR51E1	Q8TCB6	317 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	ZFP90	Q8TF47	636 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	TMEM230	Q96A57	120 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	ROPN1L	Q96C74	230 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	SLC25A38	Q96DW6	304 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	GPR82	Q96P67	336 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	TM2D1	Q9BX74	207 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	SRXN1	Q9BYN0	137 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	IFI27L2	Q9H2X8	130 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	EXOSC3	Q9NQT5	275 aa	Known RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	ACER3	Q9NUN7	267 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	MRPL27	Q9P0M9	148 aa	Known RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	RSL24D1	Q9UHA3	163 aa	Known RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	VAX2	Q9UIW0	290 aa		3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	DIDO1	Q9BTC0	2240 aa	Known RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	ANKHD1	Q8IWZ3	2542 aa	Known RBP	3.07	□□□□□ -1.92
LRRC28-222	ENST00000561431	ANKRD17	O75179	2603 aa	Known RBP	3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	HIVEP1	P15822	2718 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	TRAV36DV7	A0A075B6V5	113 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	IGKV1D-8	A0A087WSZ0	117 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431		A0A0G2JLM5	398 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	ZNF726	A6NNF4	738 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	EDF1	O60869	148 aa	Known RBP	3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	KBTBD11	O94819	623 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	MMP7	P09237	267 aa	Predicted RBP	3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	ORM2	P19652	201 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	CXCL3	P19876	107 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	AGTR1	P30556	359 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	SRI	P30626	198 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	GPR6	P46095	362 aa	Predicted RBP	3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	POLR2J	P52435	117 aa	Known RBP	3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	H2BFS	P57053	126 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	PPP3R1	P63098	170 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	TNFAIP6	P98066	277 aa	Predicted RBP	3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	PMAIP1	Q13794	54 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	RGN	Q15493	299 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	BATF	Q16520	125 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	NSUN5P1	Q3KNT7	163 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	PAGE3	Q5JUK9	113 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	TMEM69	Q5SWH9	247 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	MRPL2	Q5T653	305 aa	Known RBP	3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	RSBN1	Q5VWQ0	802 aa	Predicted RBP	3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	CGB2	Q6NT52	195 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	NAA40	Q86UY6	237 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	LYG1	Q8N1E2	194 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	FTMT	Q8N4E7	242 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	CNEP1R1	Q8N9A8	125 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	OR11H6	Q8NGC7	330 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	RFESD	Q8TAC1	157 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	LINC01560	Q8TB33	94 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	SFT2D1	Q8WV19	159 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	FMC1	Q96HJ9	113 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	FAM19A4	Q96LR4	140 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	RDH12	Q96NR8	316 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	KIR2DL4	Q99706	377 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	OR51E2	Q9H255	320 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	VCX	Q9H320	206 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	TMEM38B	Q9NVV0	291 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	KCNIP1	Q9NZI2	227 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	HDGFL3	Q9Y3E1	203 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431		U3KQ87	197 aa		3.06	□□□□□ -1.92
LRRC28-222	ENST00000561431	GTF3C1	Q12789	2109 aa		3.05	□□□□□ -1.92
LRRC28-222	ENST00000561431	MYO7B	Q6PIF6	2116 aa		3.05	□□□□□ -1.92
LRRC28-222	ENST00000561431	AKAP9	Q99996	3911 aa		3.05	□□□□□ -1.92
LRRC28-222	ENST00000561431	TRAV9-2	A0A087WT02	112 aa		3.05	□□□□□ -1.92
LRRC28-222	ENST00000561431		A0A087WUU8	490 aa		3.05	□□□□□ -1.92
LRRC28-222	ENST00000561431	IGHV3-15	A0A0B4J1V0	119 aa		3.05	□□□□□ -1.92
LRRC28-222	ENST00000561431		A0A0X1KG70	313 aa		3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms