RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 SERF1AO75920 110 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 OR2H2O95918 312 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 IGLV3-1P01715 115 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 IGHV3-7P01780 117 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 REG1AP05451 166 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 GSTT2P0CG29 244 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 GSTT2BP0CG30 244 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF44P15621 663 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 HIST1H1CP16403 213 aaKnown RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 PRKACAP17612 351 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 GNRHRP30968 328 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 ETV6P41212 452 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 RPS27P42677 84 aaKnown RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 MAGEA2P43356 314 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 GZMMP51124 257 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 ATP1B3P54709 279 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 CXCR4P61073 352 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 IFITM3Q01628 133 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 ATP5G2Q06055 141 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 SPCS2Q15005 226 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 CDK5R1Q15078 307 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 AGKQ53H12 422 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 PAGE3Q5JUK9 113 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 SYT6Q5T7P8 510 aaPredicted RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 GPR107Q5VW38 600 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 FAM71F2Q6NXP2 309 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 MSRB3Q8IXL7 192 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 BATF2Q8N1L9 274 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 DHRSXQ8N5I4 330 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 OR8J3Q8NGG0 315 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 OR9I1Q8NGQ6 314 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 OR4K13Q8NH42 304 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 KCNG3Q8TAE7 436 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 DYNC2LI1Q8TCX1 351 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 LEAP2Q969E1 77 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 BORCS8Q96FH0 119 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 COQ2Q96H96 371 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 PPP1R36Q96LQ0 422 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 UQCC2Q9BRT2 126 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 FAM103A1Q9BTL3 118 aaKnown RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 SLC25A39Q9BZJ4 359 aaPredicted RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 NAA50Q9GZZ1 169 aaKnown RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 PARP12Q9H0J9 701 aaKnown RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 HMG20AQ9NP66 347 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 FKBP14Q9NWM8 211 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 RHBDL2Q9NX52 303 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 SLC25A37Q9NYZ2 338 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 DNAJC27Q9NZQ0 273 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 ENOPH1Q9UHY7 261 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 PAIP2BQ9ULR5 123 aaKnown RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 EXOSC1Q9Y3B2 195 aaKnown RBP1.89□□□□□ -2.11
LRRC28-218ENST00000560236 UFC1Q9Y3C8 167 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 TRBV7-9A0A0J9YWB2 115 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 SMIM9A6NGZ8 99 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 TVP23AA6NH52 213 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 OR5H14A6NHG9 310 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 J3QRK9 145 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 SDCBPO00560 298 aaPredicted RBP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 FCN1O00602 326 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 DEGS1O15121 323 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 SULT1B1O43704 296 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 GATBO75879 557 aaKnown RBP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 CA2P00918 260 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 SERPINA3P01011 423 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 CD5P06127 495 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 OCM2P0CE71 109 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 OCMP0CE72 109 aaPredicted RBP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 PTBP1P26599 531 aaKnown RBP eCLIP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 PSMB6P28072 239 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 PYCR1P32322 319 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 GLP1RP43220 463 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 RBP2P50120 134 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 SELENOWP63302 87 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 IFITM2Q01629 132 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 LIPEQ05469 1076 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 EXOSC2Q13868 293 aaKnown RBP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF846Q147U1 533 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 FXYD3Q14802 87 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 LTC4SQ16873 150 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 RGS21Q2M5E4 152 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 UBE2UQ5VVX9 321 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 TTC23Q5W5X9 447 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 KDM4DQ6B0I6 523 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 RPL13AP3Q6NVV1 102 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 DEGS2Q6QHC5 323 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 PLEKHG7Q6ZR37 379 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 Q6ZSR3 168 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 SLC25A26Q70HW3 274 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 ELMOD2Q8IZ81 293 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 LINC00471Q8N535 108 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF439Q8NDP4 499 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 CCDC54Q8NEL0 328 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 OR5T1Q8NG75 326 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 SRSF12Q8WXF0 261 aaKnown RBP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 S100ZQ8WXG8 99 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 PHYHIPQ92561 330 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 TAMM41Q96BW9 452 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 NIPSNAP3BQ9BS92 247 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 UPK3BQ9BT76 320 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 GABARAPL3Q9BY60 117 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms