RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 HIST1H2BMQ99879 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 TMEM133Q9H2Q1 129 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 TECRQ9NZ01 308 aaKnown RBP6.56□□□□□ -1.36
SMAD3-212ENST00000559937 AMMECR1Q9Y4X0 333 aaPredicted RBP6.56□□□□□ -1.36
SMAD3-212ENST00000559937 TRAV9-1A0A075B6T8 112 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 MDFIC2A0A1B0GVS7 189 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 C9JCJ5 164 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 PPP5D1E7EU14 171 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 IGLV2-23P01705 113 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 IGHV2-70P01814 119 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 TRGC1P0CF51 173 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 DEFA4P12838 97 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 MYOD1P15172 320 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 NDUFA6P56556 154 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 UBE2G2P60604 165 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 SELENOTP62341 195 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 GAMTQ14353 236 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 ZNF672Q499Z4 452 aaPredicted RBP6.55□□□□□ -1.36
SMAD3-212ENST00000559937 DNLZQ5SXM8 178 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 PVRIGQ6DKI7 326 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 SLC16A13Q7RTY0 426 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 MMD2Q8IY49 270 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 C11orf42Q8N5U0 333 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 THAP8Q8NA92 274 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 BEND2Q8NDZ0 799 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 OR2T10Q8NGZ9 312 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 FRZBQ92765 325 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 ZNRD1Q9P1U0 126 aa6.55□□□□□ -1.36
SMAD3-212ENST00000559937 ASH1LQ9NR48 2969 aaKnown RBP6.55□□□□□ -1.36
SMAD3-212ENST00000559937 CGB1A6NKQ9 187 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 NDUFB4O95168 129 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 IGLV1-47P01700 117 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 S100A2P29034 98 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 OR10J1P30954 320 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 COMPP49747 757 aaPredicted RBP6.54□□□□□ -1.36
SMAD3-212ENST00000559937 COA6Q5JTJ3 125 aaKnown RBP6.54□□□□□ -1.36
SMAD3-212ENST00000559937 FAM78BQ5VT40 261 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 ETFRF1Q6IPR1 90 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 ZNF841Q6ZN19 808 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 MUC15Q8N387 334 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 ZNF114Q8NC26 417 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 OR4P4Q8NGL7 312 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 OR1L4Q8NGR5 311 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 PFDN5Q99471 154 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 RNF5Q99942 180 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 CLEC7AQ9BXN2 247 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 ZNF430Q9H8G1 570 aaPredicted RBP6.54□□□□□ -1.36
SMAD3-212ENST00000559937 SEPSECSQ9HD40 501 aaKnown RBP6.54□□□□□ -1.36
SMAD3-212ENST00000559937 GAR1Q9NY12 217 aaKnown RBP6.54□□□□□ -1.36
SMAD3-212ENST00000559937 MIOXQ9UGB7 285 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 PITPNC1Q9UKF7 332 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 YTHDF2Q9Y5A9 579 aaKnown RBP6.54□□□□□ -1.36
SMAD3-212ENST00000559937 MALRD1Q5VYJ5 2156 aa6.54□□□□□ -1.36
SMAD3-212ENST00000559937 NAV2Q8IVL1 2488 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 IGKV1OR2-108A0A075B7D4 117 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 IGHV2-26A0A0B4J1V2 119 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 SCO2A0A1W2PP80 73 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 A0A1W2PRE2 83 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 PSMB11A5LHX3 300 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 FAM90A27PA6NNH2 459 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 CCL21O00585 134 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 PLAUP00749 431 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 CRYGBP07316 175 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 C8orf88P0DMB2 117 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 FOXL1Q12952 345 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 SPATA31B1PQ5VZV4 182 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 MIR17HGQ75NE6 70 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 HIST3H2BBQ8N257 126 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 LY6G5BQ8NDX9 201 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 OR10W1Q8NGF6 305 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 OR8B3Q8NGG8 313 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 ACY3Q96HD9 319 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 SFRP2Q96HF1 295 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 OR8B2Q96RD0 313 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 SRSF8Q9BRL6 282 aaKnown RBP6.53□□□□□ -1.36
SMAD3-212ENST00000559937 OR51M1Q9H341 326 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 LRRK2Q5S007 2527 aa6.53□□□□□ -1.36
SMAD3-212ENST00000559937 PKDREJQ9NTG1 2253 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 HECTD1Q9ULT8 2610 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 TRBV20OR9-2A0A075B6H5 130 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 A0A1W2PPQ1 181 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 TCRBV4S1A1TA0A5B7 111 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 CORTO00230 105 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 SLC25A17O43808 307 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 PRB1P04280 392 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 CRYGCP07315 174 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 RPL27AP46776 148 aaKnown RBP6.52□□□□□ -1.37
SMAD3-212ENST00000559937 REG1BP48304 166 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 BPIFB3P59826 476 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 WT1-ASQ06250 92 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 PSG5Q15238 335 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 MRGPRG-AS1Q2M3A8 158 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 ACTL10Q5JWF8 245 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 TMEM183AQ8IXX5 376 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 OR10G8Q8NGN5 311 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 OR4X1Q8NH49 305 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 LINC01560Q8TB33 94 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 NEU4Q8WWR8 484 aaPredicted RBP6.52□□□□□ -1.37
SMAD3-212ENST00000559937 TMEM190Q8WZ59 177 aa6.52□□□□□ -1.37
SMAD3-212ENST00000559937 TRGV9Q99603 122 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms