RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 H0YIZ8 118 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 CCNKO75909 580 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 OR2J3O76001 311 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 PRH1P02810 166 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 IFNA4P05014 189 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 OR8U8P0C7N1 319 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 LYL1P12980 280 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 P2RY1P47900 373 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 MFAP2P55001 183 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 TPPP2P59282 170 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 ATP5G2Q06055 141 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 EXOSC2Q13868 293 aaKnown RBP9.71□□□□□ -0.86
SHMT2-221ENST00000555773 KIAA0141Q14154 515 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-221ENST00000555773 FAM209BQ5JX69 171 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 C11orf87Q6NUJ2 197 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 TMEM14EPQ6UXP3 125 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 MYOZ3Q8TDC0 251 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 VN1R17PQ8TDU5 208 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 TMEM170AQ8WVE7 144 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 CXorf58Q96LI9 332 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 UBE2E2Q96LR5 201 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 LYRM2Q9NU23 88 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-221ENST00000555773 DMRT1Q9Y5R6 373 aa9.71□□□□□ -0.86
SHMT2-221ENST00000555773 RPS10-NUDT3A0A1W2PQS6 291 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 TCRBV4S1A1TA0A5B7 111 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 NDUFB8O95169 186 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 RPLP1P05386 114 aaKnown RBP9.7□□□□□ -0.86
SHMT2-221ENST00000555773 SLC25A4P12235 298 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 GPX4P36969 197 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-221ENST00000555773 CDX1P47902 265 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-221ENST00000555773 CAV2P51636 162 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 TCTEX1D4Q5JR98 221 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 ETV3LQ6ZN32 361 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 C19orf35Q6ZS72 473 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 AKAP14Q86UN6 197 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 ZNF491Q8N8L2 437 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 CACNG8Q8WXS5 425 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 MISP3Q96FF7 219 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 OR4C12Q96R67 309 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 ATP6V0BQ99437 205 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 SLC25A31Q9H0C2 315 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 RANGRFQ9HD47 186 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-221ENST00000555773 OR5AC2Q9NZP5 309 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 PAIP2BQ9ULR5 123 aaKnown RBP9.7□□□□□ -0.86
SHMT2-221ENST00000555773 TSSC4Q9Y5U2 329 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-221ENST00000555773 COL6A5A8TX70 2615 aa9.7□□□□□ -0.86
SHMT2-221ENST00000555773 TRAV14DV4A0A0A6YYC5 116 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 TRBV7-1A0A0A6YYK4 115 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 FAM24AA6NFZ4 105 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 H3BP45 60 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 I3L2K1 104 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 CD28P10747 220 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 C15orf32Q32M92 178 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 Q5BKY6 102 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 C12orf54Q6X4T0 127 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 TCTE3Q8IZS6 198 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 TMEM252Q8N6L7 170 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 OR10P1Q8NGE3 313 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 EEF1AKMT3Q96AZ1 226 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 ST6GAL2Q96JF0 529 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 TXN2Q99757 166 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 ZNF747Q9BV97 191 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 MBD2Q9UBB5 411 aa9.69□□□□□ -0.86
SHMT2-221ENST00000555773 FBN1P35555 2871 aaKnown RBP9.69□□□□□ -0.86
SHMT2-221ENST00000555773 TET2Q6N021 2002 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-221ENST00000555773 K7EIM0 57 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 MT-CO2P00403 227 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 METTL15P1P0C7V9 234 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 FCGR2BP31994 310 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-221ENST00000555773 OPRK1P41145 380 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 SULT1A1P50225 295 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 KRTAP10-3P60369 221 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 CD69Q07108 199 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 KRTAP21-3Q3LHN1 58 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 LCNL1Q6ZST4 164 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 STX12Q86Y82 276 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 C3orf56Q8N813 242 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 SCARB1Q8WTV0 552 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 DCUN1D4Q92564 292 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 PINX1Q96BK5 328 aaKnown RBP9.68□□□□□ -0.86
SHMT2-221ENST00000555773 CITED1Q99966 193 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 CITED2Q99967 270 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-221ENST00000555773 GGACTQ9BVM4 153 aa9.68□□□□□ -0.86
SHMT2-221ENST00000555773 GAR1Q9NY12 217 aaKnown RBP9.68□□□□□ -0.86
SHMT2-221ENST00000555773 PMS2P5A8MQ11 134 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 S100A11P31949 105 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 NUP62P37198 522 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-221ENST00000555773 NPBWR1P48145 328 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 MFAP4P55083 255 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 HBG1P69891 147 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 HBG2P69892 147 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 RUNX1Q01196 453 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 BAXQ07812 192 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 ZNF343Q6P1L6 599 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 ZNF546Q86UE3 836 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 NDUFA11Q86Y39 141 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 ZNF502Q8TBZ5 544 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 FNDC4Q9H6D8 234 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms