RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TECRQ9NZ01 308 aaKnown RBP11.24□□□□□ -0.61
HDAC7-228ENST00000548938 IDI2-AS1Q9NZ38 188 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 TRGV5A0A0B4J1U4 118 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 USF1P22415 310 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-228ENST00000548938 TSPOP30536 169 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 INO80CQ6PI98 192 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-228ENST00000548938 UNQ5815/PRO19632Q6UWF5 114 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 MDS2Q8NDY4 140 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 KLRC4-KLRK1H3BQV0 150 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 REG1AP05451 166 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 KIR2DS2P43631 304 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 PPOXP50336 477 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 ZNRF1Q8ND25 227 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
HDAC7-228ENST00000548938 SPENQ96T58 3664 aaKnown RBP11.23□□□□□ -0.61
HDAC7-228ENST00000548938 SAA2P0DJI9 122 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-228ENST00000548938 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 STUMQ69YW2 141 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 C19orf35Q6ZS72 473 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 KLHDC1Q8N7A1 406 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 RNASE8Q8TDE3 154 aaKnown RBP11.22□□□□□ -0.61
HDAC7-228ENST00000548938 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 LINC00479Q96M42 142 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 CORO2AQ92828 525 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 ZNF331Q9NQX6 463 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-228ENST00000548938 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 TNCP24821 2201 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 F2RL2O00254 374 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 IGKV3-15P01624 115 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 TNXAQ16473 311 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 C16orf54Q6UWD8 224 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 FER1L6-AS2Q96M78 137 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 CALYQ9NYX4 217 aa11.22□□□□□ -0.61
HDAC7-228ENST00000548938 LAMA5O15230 3695 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 MGST3O14880 152 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 CECR9P0C854 216 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 MLANAQ16655 118 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 CT45A1Q5HYN5 189 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 SPACA3Q8IXA5 215 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 OR2Z1Q8NG97 314 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 OR9G1Q8NH87 305 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 CT45A3Q8NHU0 189 aa11.21□□□□□ -0.61
HDAC7-228ENST00000548938 ZFHX4Q86UP3 3567 aa11.21□□□□□ -0.62
HDAC7-228ENST00000548938 SELENOVP59797 346 aa11.21□□□□□ -0.62
HDAC7-228ENST00000548938 Q56UQ5 140 aa11.21□□□□□ -0.62
HDAC7-228ENST00000548938 CNEP1R1Q8N9A8 125 aa11.21□□□□□ -0.62
HDAC7-228ENST00000548938 MRPL27Q9P0M9 148 aaKnown RBP11.21□□□□□ -0.62
HDAC7-228ENST00000548938 GVINP1Q7Z2Y8 2422 aa11.21□□□□□ -0.62
HDAC7-228ENST00000548938 PRR31Q5SQ13 230 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 EBLN2Q6P2I7 272 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 Q6ZT83 130 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 ZNF355PQ9NSJ1 428 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 A0A1W2PRE2 83 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 FAM181BA6NEQ2 426 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 SRRM5B3KS81 715 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 FNDC10F2Z333 226 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 J3QR06 171 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 HSBP1O75506 76 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 HOXC12P31275 282 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 MFAP2P55001 183 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 TAS2R45P59539 299 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 CR1LQ2VPA4 569 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 LEMD1Q68G75 181 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 MRPS16Q9Y3D3 137 aaKnown RBP11.2□□□□□ -0.62
HDAC7-228ENST00000548938 COX11Q9Y6N1 276 aa11.2□□□□□ -0.62
HDAC7-228ENST00000548938 IGHV2-26A0A0B4J1V2 119 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 RBX1P62877 108 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 SRSF6Q13247 344 aaKnown RBP11.19□□□□□ -0.62
HDAC7-228ENST00000548938 SPRNQ5BIV9 151 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 GCSAMQ8N6F7 178 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 TP73-AS1Q9UF72 201 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 M0R2Z0 102 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 C8orf88P0DMB2 117 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 CD46P15529 392 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 GPR6P46095 362 aaPredicted RBP11.19□□□□□ -0.62
HDAC7-228ENST00000548938 RPL8P62917 257 aaKnown RBP11.19□□□□□ -0.62
HDAC7-228ENST00000548938 UBE2L3P68036 154 aaKnown RBP11.19□□□□□ -0.62
HDAC7-228ENST00000548938 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 C17orf58Q2M2W7 97 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 LYG1Q8N1E2 194 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 SSBP4Q9BWG4 385 aaPredicted RBP11.19□□□□□ -0.62
HDAC7-228ENST00000548938 COMMD5Q9GZQ3 224 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 CEP250Q9BV73 2442 aa11.19□□□□□ -0.62
HDAC7-228ENST00000548938 NKX6-3A6NJ46 265 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 TOMM40O96008 361 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 RNASEKQ6P5S7 137 aaKnown RBP11.18□□□□□ -0.62
HDAC7-228ENST00000548938 CLEC2AQ6UVW9 174 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 SPATA12Q7Z6I5 190 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 KIR3DL3Q8N743 410 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 TRIB1Q96RU8 372 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 BET1LQ9NYM9 111 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 TRAV9-2A0A087WT02 112 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms