RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 LINC01619G3V211 115 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 K7EIM0 57 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 CCSO14618 274 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 IGHV3-23P01764 117 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 SUB1P53999 127 aaKnown RBP eCLIP16■□□□□ 0.154e-6■■■■■ 28.5
SCARB1-211ENST00000546215 IAH1Q2TAA2 248 aaPredicted RBP16■□□□□ 0.15
SCARB1-211ENST00000546215 OR4D5Q8NGN0 318 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 VN1R17PQ8TDU5 208 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 EEF1AKMT3Q96AZ1 226 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 CCDC140Q96MF4 163 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 HIPK2Q9H2X6 1198 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 OR8U8P0C7N1 319 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 HTR2BP41595 481 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 ID3Q02535 119 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 MISP3Q96FF7 219 aa16■□□□□ 0.15
SCARB1-211ENST00000546215 TRBV7-1A0A0A6YYK4 115 aa15.99■□□□□ 0.15
SCARB1-211ENST00000546215 I3L2K1 104 aa15.99■□□□□ 0.15
SCARB1-211ENST00000546215 ZNF502Q8TBZ5 544 aa15.99■□□□□ 0.15
SCARB1-211ENST00000546215 SCARB1Q8WTV0 552 aa15.99■□□□□ 0.15
SCARB1-211ENST00000546215 MAGT1Q9H0U3 335 aa15.99■□□□□ 0.15
SCARB1-211ENST00000546215 IGHV3-21A0A0B4J1V1 117 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 MED6O75586 246 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 SLURP1P55000 103 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 RGS21Q2M5E4 152 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 C2orf83Q53S99 150 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 FAM209BQ5JX69 171 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 ZBTB8BQ8NAP8 495 aaPredicted RBP15.98■□□□□ 0.15
SCARB1-211ENST00000546215 SLC24A4Q8NFF2 622 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 TMEM170AQ8WVE7 144 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 U3KQ87 197 aa15.98■□□□□ 0.15
SCARB1-211ENST00000546215 BMPR1BO00238 502 aa15.97■□□□□ 0.15
SCARB1-211ENST00000546215 SYNGR2O43760 224 aa15.97■□□□□ 0.15
SCARB1-211ENST00000546215 CD33P20138 364 aa15.97■□□□□ 0.15
SCARB1-211ENST00000546215 NKX2-1P43699 371 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-211ENST00000546215 TATDN3Q17R31 274 aa15.97■□□□□ 0.15
SCARB1-211ENST00000546215 CLEC19AQ6UXS0 136 aa15.97■□□□□ 0.15
SCARB1-211ENST00000546215 GSKIPQ9P0R6 139 aa15.97■□□□□ 0.15
SCARB1-211ENST00000546215 C7orf66A4D0T2 115 aa15.96■□□□□ 0.15
SCARB1-211ENST00000546215 FAM25EA8MYX2 175 aa15.96■□□□□ 0.15
SCARB1-211ENST00000546215 MT-CO2P00403 227 aa15.96■□□□□ 0.15
SCARB1-211ENST00000546215 CLEC3BP05452 202 aa15.96■□□□□ 0.15
SCARB1-211ENST00000546215 IAPPP10997 89 aa15.96■□□□□ 0.15
SCARB1-211ENST00000546215 HOXD3P31249 432 aaPredicted RBP15.96■□□□□ 0.15
SCARB1-211ENST00000546215 DLX4Q92988 240 aaPredicted RBP15.96■□□□□ 0.15
SCARB1-211ENST00000546215 PINX1Q96BK5 328 aaKnown RBP15.96■□□□□ 0.15
SCARB1-211ENST00000546215 C21orf62Q9NYP8 219 aa15.96■□□□□ 0.15
SCARB1-211ENST00000546215 C5orf51A6NDU8 294 aa15.96■□□□□ 0.14
SCARB1-211ENST00000546215 PPP5D1E7EU14 171 aa15.96■□□□□ 0.14
SCARB1-211ENST00000546215 F8W735 103 aaPredicted RBP15.96■□□□□ 0.14
SCARB1-211ENST00000546215 CORTO00230 105 aa15.96■□□□□ 0.14
SCARB1-211ENST00000546215 ZP3P21754 424 aa15.96■□□□□ 0.14
SCARB1-211ENST00000546215 NPY1RP25929 384 aa15.96■□□□□ 0.14
SCARB1-211ENST00000546215 POLR2GP62487 172 aaKnown RBP eCLIP15.96■□□□□ 0.14
SCARB1-211ENST00000546215 DCUN1D4Q92564 292 aa15.96■□□□□ 0.14
SCARB1-211ENST00000546215 WRBO00258 174 aa15.95■□□□□ 0.14
SCARB1-211ENST00000546215 IFNA10P01566 189 aa15.95■□□□□ 0.14
SCARB1-211ENST00000546215 GSG1LQ6UXU4 331 aa15.95■□□□□ 0.14
SCARB1-211ENST00000546215 C2orf50Q96LR7 162 aa15.95■□□□□ 0.14
SCARB1-211ENST00000546215 ATP6V0BQ99437 205 aa15.95■□□□□ 0.14
SCARB1-211ENST00000546215 FNDC4Q9H6D8 234 aaPredicted RBP15.95■□□□□ 0.14
SCARB1-211ENST00000546215 NBEAL1Q6ZS30 2694 aa15.94■□□□□ 0.14
SCARB1-211ENST00000546215 IGHV3-48P01763 117 aa15.94■□□□□ 0.14
SCARB1-211ENST00000546215 GPR183P32249 361 aa15.94■□□□□ 0.14
SCARB1-211ENST00000546215 ATP5IP56385 69 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-211ENST00000546215 KLF5Q13887 457 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-211ENST00000546215 OXA1LQ15070 435 aa15.94■□□□□ 0.14
SCARB1-211ENST00000546215 CIB3Q96Q77 187 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-211ENST00000546215 MBPP02686 304 aaPredicted RBP15.93■□□□□ 0.14
SCARB1-211ENST00000546215 FCGR2BP31994 310 aaPredicted RBP15.93■□□□□ 0.14
SCARB1-211ENST00000546215 ARL3P36405 182 aa15.93■□□□□ 0.14
SCARB1-211ENST00000546215 MLANAQ16655 118 aa15.93■□□□□ 0.14
SCARB1-211ENST00000546215 RPEL1Q2QD12 228 aa15.93■□□□□ 0.14
SCARB1-211ENST00000546215 NOXA1Q86UR1 476 aa15.93■□□□□ 0.14
SCARB1-211ENST00000546215 RNASEH2CQ8TDP1 164 aaKnown RBP15.93■□□□□ 0.14
SCARB1-211ENST00000546215 ALG5Q9Y673 324 aa15.93■□□□□ 0.14
SCARB1-211ENST00000546215 OR2T8A6NH00 312 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 C15orf62A8K5M9 175 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 GGCTO75223 188 aaKnown RBP15.92■□□□□ 0.14
SCARB1-211ENST00000546215 SCGB1D2O95969 90 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 IGLL1P15814 213 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 OPRK1P41145 380 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 MFAP4P55083 255 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 IL15RAQ13261 267 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 RCC1LQ96I51 464 aaKnown RBP15.92■□□□□ 0.14
SCARB1-211ENST00000546215 ZC4H2Q9NQZ6 224 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 GOSR2O14653 212 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 OVOL1O14753 267 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 SSNA1O43805 119 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 SSSCA1O60232 199 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 OR2C1O95371 312 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 LY86O95711 162 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 TMEM50AO95807 157 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 UBAC2Q8NBM4 344 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 BSCL2Q96G97 398 aaPredicted RBP15.92■□□□□ 0.14
SCARB1-211ENST00000546215 TXN2Q99757 166 aa15.92■□□□□ 0.14
SCARB1-211ENST00000546215 RCL1Q9Y2P8 373 aaKnown RBP15.92■□□□□ 0.14
SCARB1-211ENST00000546215 TGOLN2O43493 480 aa15.91■□□□□ 0.14
SCARB1-211ENST00000546215 SIX6O95475 246 aa15.91■□□□□ 0.14
SCARB1-211ENST00000546215 PAX9P55771 341 aa15.91■□□□□ 0.14
SCARB1-211ENST00000546215 SYNJ2BPP57105 145 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms