RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 TCTE3Q8IZS6 198 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 LILRB2Q8N423 598 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 INO80EQ8NBZ0 244 aaPredicted RBP9.31□□□□□ -0.92
DDB1-223ENST00000543658 OR10P1Q8NGE3 313 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 RNASEH2CQ8TDP1 164 aaKnown RBP9.31□□□□□ -0.92
DDB1-223ENST00000543658 ST6GAL2Q96JF0 529 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 FBXL7Q9UJT9 491 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 IGLV11-55A0A075B6I3 123 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 FAM24AA6NFZ4 105 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 C15orf62A8K5M9 175 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 SMLR1H3BR10 107 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 SCGB2A1O75556 95 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 SLC25A4P12235 298 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 RHOGP84095 191 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 CFHR3Q02985 330 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 BAXQ07812 192 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 BSXQ3C1V8 233 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 ZNF546Q86UE3 836 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 NECAP1Q8NC96 275 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 SLC35E1Q96K37 410 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 CXorf58Q96LI9 332 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 OR4C12Q96R67 309 aa9.3□□□□□ -0.92
DDB1-223ENST00000543658 H0YIZ8 118 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 SOX15O60248 233 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 TMEM50AO95807 157 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 IGLV1-40P01703 118 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 LYL1P12980 280 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 PSMB8P28062 276 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 RPL12P30050 165 aaKnown RBP9.29□□□□□ -0.92
DDB1-223ENST00000543658 SULT1A1P50225 295 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 RAB9AP51151 201 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 PAX9P55771 341 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 DEFA5Q01523 94 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 ATP5G2Q06055 141 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 KRTAP24-1Q3LI83 254 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 ZFP69Q49AA0 526 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 TMEM14EPQ6UXP3 125 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 TMEM252Q8N6L7 170 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 EEF1AKMT3Q96AZ1 226 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 USMG5Q96IX5 58 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 RNF126Q9BV68 326 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 C19orf24Q9BVV8 132 aa9.29□□□□□ -0.92
DDB1-223ENST00000543658 C2CD3Q4AC94 2353 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 TCRBV4S1A1TA0A5B7 111 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 IGSF23A1L1A6 192 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 SMCO3A2RU48 225 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 ARPC5O15511 151 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 CST7O76096 145 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 BRI3O95415 125 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 MT-CO2P00403 227 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 C1QBP02746 253 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 PROK1P58294 105 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 EWSR1Q01844 656 aaKnown RBP eCLIP9.28□□□□□ -0.921e-6■□□□□ 10.3
DDB1-223ENST00000543658 SLC38A11Q08AI6 406 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 C15orf32Q32M92 178 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 AWAT1Q58HT5 328 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 FAM209BQ5JX69 171 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 ACSM6Q6P461 480 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 SLC16A13Q7RTY0 426 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 TMEM217Q8N7C4 229 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 OR1S2Q8NGQ3 325 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 C11orf1Q9H5F2 150 aa9.28□□□□□ -0.92
DDB1-223ENST00000543658 TRBV7-1A0A0A6YYK4 115 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 TRBV9A0A0B4J1U6 114 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 IGHV3-21A0A0B4J1V1 117 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 NUDT19A8MXV4 375 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 NDUFB8O95169 186 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
DDB1-223ENST00000543658 S100A11P31949 105 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 NPBWR1P48145 328 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 AP2S1P53680 142 aaPredicted RBP9.27□□□□□ -0.93
DDB1-223ENST00000543658 MFAP2P55001 183 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 AKR1C1Q04828 323 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 CD69Q07108 199 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 Q56UQ5 140 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 Q5BKY6 102 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 C12orf54Q6X4T0 127 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 LCNL1Q6ZST4 164 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 C11orf44Q8N8P7 122 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 UBAC2Q8NBM4 344 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 VN1R17PQ8TDU5 208 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 HYLS1Q96M11 299 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 MFFQ9GZY8 342 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 GAR1Q9NY12 217 aaKnown RBP9.27□□□□□ -0.93
DDB1-223ENST00000543658 TNFSF18Q9UNG2 199 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 HSPB11Q9Y547 144 aa9.27□□□□□ -0.93
DDB1-223ENST00000543658 JMJD1CQ15652 2540 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 GNG7O60262 68 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 IGHV3-11P01762 117 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 GPX4P36969 197 aaPredicted RBP9.26□□□□□ -0.93
DDB1-223ENST00000543658 MFAP4P55083 255 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 RIPPLY3P57055 190 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 DLK1P80370 383 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 ATP6V1FQ16864 119 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 ACOT7LQ6ZUV0 252 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 TMEM170AQ8WVE7 144 aa9.26□□□□□ -0.93
DDB1-223ENST00000543658 WFDC12Q8WWY7 111 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms