RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 CNBD2Q96M20 576 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 TSC22D3Q99576 134 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 DIABLOQ9NR28 239 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 SSR3Q9UNL2 185 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 IGHV4-4A0A075B6R2 117 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 IGHV3-48P01763 117 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 EIF4EP06730 217 aaKnown RBP14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 MIFP14174 115 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 TMEM41BQ5BJD5 291 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 Q6ZTC4 211 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 STHQ8IWL8 128 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 ZNF114Q8NC26 417 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 TSPAN14Q8NG11 270 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 EHFQ9NZC4 300 aa14.46□□□□□ -0.09
LPCAT3-210ENST00000540090 PKD1P98161 4303 aa14.45□□□□□ -0.1
LPCAT3-210ENST00000540090 ZNF705EA8MWA4 302 aaPredicted RBP14.45□□□□□ -0.1
LPCAT3-210ENST00000540090 GNG7O60262 68 aa14.45□□□□□ -0.1
LPCAT3-210ENST00000540090 CLEC2LP0C7M8 214 aa14.45□□□□□ -0.1
LPCAT3-210ENST00000540090 RFX2P48378 723 aa14.45□□□□□ -0.1
LPCAT3-210ENST00000540090 CMTM1Q8IZ96 169 aa14.45□□□□□ -0.1
LPCAT3-210ENST00000540090 ZNF2Q9BSG1 426 aaPredicted RBP14.45□□□□□ -0.1
LPCAT3-210ENST00000540090 RNF126Q9BV68 326 aa14.45□□□□□ -0.1
LPCAT3-210ENST00000540090 MEIS3P1A6NDR6 274 aa14.44□□□□□ -0.1
LPCAT3-210ENST00000540090 PSMB9P28065 219 aa14.44□□□□□ -0.1
LPCAT3-210ENST00000540090 RPL11P62913 178 aaKnown RBP14.44□□□□□ -0.1
LPCAT3-210ENST00000540090 MXD1Q05195 221 aa14.44□□□□□ -0.1
LPCAT3-210ENST00000540090 IDNKQ5T6J7 187 aa14.44□□□□□ -0.1
LPCAT3-210ENST00000540090 PVRIGQ6DKI7 326 aa14.44□□□□□ -0.1
LPCAT3-210ENST00000540090 TRPT1Q86TN4 253 aaKnown RBP14.44□□□□□ -0.1
LPCAT3-210ENST00000540090 X6R8D5 127 aa14.44□□□□□ -0.1
LPCAT3-210ENST00000540090 ELOA3CA0A087WX78 387 aaPredicted RBP14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 IGHV3-66A0A0C4DH42 116 aa14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 ANKRD65E5RJM6 399 aa14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 GABARAPL2P60520 117 aa14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 MORN3Q6PF18 240 aaPredicted RBP14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 SPARTQ8N0X7 666 aa14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 PINX1Q96BK5 328 aaKnown RBP14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 ZFAND3Q9H8U3 227 aa14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 FAM212BQ9NTI7 297 aaPredicted RBP14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 ABCA13Q86UQ4 5058 aa14.43□□□□□ -0.1
LPCAT3-210ENST00000540090 GPR31O00270 319 aa14.42□□□□□ -0.1
LPCAT3-210ENST00000540090 SPP1P10451 314 aa14.42□□□□□ -0.1
LPCAT3-210ENST00000540090 PRCDQ00LT1 54 aa14.42□□□□□ -0.1
LPCAT3-210ENST00000540090 ZNF600Q6ZNG1 722 aa14.42□□□□□ -0.1
LPCAT3-210ENST00000540090 CENPSQ8N2Z9 138 aa14.42□□□□□ -0.1
LPCAT3-210ENST00000540090 IFT46Q9NQC8 304 aa14.42□□□□□ -0.1
LPCAT3-210ENST00000540090 ANAPC10Q9UM13 185 aa14.42□□□□□ -0.1
LPCAT3-210ENST00000540090 PUS1Q9Y606 427 aaKnown RBP eCLIP14.42□□□□□ -0.1
LPCAT3-210ENST00000540090 PRSS29PA6NIE9 313 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 RTL8CO15255 209 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 PMP2P02689 132 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 NPBWR1P48145 328 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 HSPA13P48723 471 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 HSPE1P61604 102 aaKnown RBP14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 ERHP84090 104 aaKnown RBP14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 POM121L12Q8N7R1 296 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 OR4A16Q8NH70 328 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 SEC22AQ96IW7 307 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 TMEM231Q9H6L2 316 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 RNF167Q9H6Y7 350 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 RABAC1Q9UI14 185 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 MUC4Q99102 2169 aa14.41□□□□□ -0.1
LPCAT3-210ENST00000540090 A0A1B0GU03 582 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 K7EQG2 157 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 NAT1P18440 290 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 C4BPBP20851 252 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 IZUMO2Q6UXV1 221 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 H2BFWTQ7Z2G1 175 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 CSNK1G2-AS1Q8NCQ2 148 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 OR6F1Q8NGZ6 308 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 FCGR1BQ92637 280 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 GRAMD2BQ96HH9 432 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 FXYD6Q9H0Q3 95 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 VCX3BQ9H321 246 aa14.4□□□□□ -0.1
LPCAT3-210ENST00000540090 A0A1W2PS18 150 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 TMEM50AO95807 157 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 AMBPP02760 352 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 P0DMU3 169 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 FAM231AP0DMU4 169 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 FAM231CP0DMU5 169 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 NPPCP23582 126 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 C12orf74Q32Q52 190 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 OR5H2Q8NGV7 314 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 TBC1D24Q9ULP9 559 aa14.39□□□□□ -0.11
LPCAT3-210ENST00000540090 AGRNO00468 2067 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 DEFB131BA0A096LNP1 70 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 KNCNA6PVL3 124 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 TMEM127O75204 238 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 IGKV1-39P01597 117 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 IGKV1D-39P04432 117 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 TAS2R46P59540 309 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 PHLDA2Q53GA4 152 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 S100A16Q96FQ6 103 aaKnown RBP14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 CELA1Q9UNI1 258 aa14.38□□□□□ -0.11
LPCAT3-210ENST00000540090 LYSMD2Q8IV50 215 aa14.37□□□□□ -0.11
LPCAT3-210ENST00000540090 STXBP6Q8NFX7 210 aa14.37□□□□□ -0.11
LPCAT3-210ENST00000540090 DCANP1Q8TF63 244 aa14.37□□□□□ -0.11
LPCAT3-210ENST00000540090 CLEC5AQ9NY25 188 aa14.37□□□□□ -0.11
LPCAT3-210ENST00000540090 M0R2N4 97 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 ZNF688P0C7X2 276 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms