RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CSMD3Q7Z407 3707 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 OR52B4Q8NGK2 314 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 MCFD2Q8NI22 146 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 MISP3Q96FF7 219 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 BSCL2Q96G97 398 aaPredicted RBP11.22□□□□□ -0.61
RAB40B-202ENST00000538809 C5orf66Q9H5L9 145 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 GPR132Q9UNW8 380 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 DISC1C4P0D8 188 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 I3L2K1 104 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 ZNF207O43670 478 aaKnown RBP11.21□□□□□ -0.61
RAB40B-202ENST00000538809 B3GALNT1O75752 331 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 ADMP35318 185 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 ELLP55199 621 aaPredicted RBP11.21□□□□□ -0.61
RAB40B-202ENST00000538809 LHFPL5Q8TAF8 219 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 GLYATL2Q8WU03 294 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 C20orf24Q9BUV8 137 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 TMEM222Q9H0R3 208 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 HIPK2Q9H2X6 1198 aa11.21□□□□□ -0.61
RAB40B-202ENST00000538809 MRPL27Q9P0M9 148 aaKnown RBP11.21□□□□□ -0.61
RAB40B-202ENST00000538809 RSL24D1Q9UHA3 163 aaKnown RBP11.21□□□□□ -0.61
RAB40B-202ENST00000538809 CDS2O95674 445 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 OR5AC1P0C628 307 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 FCGR2BP31994 310 aaPredicted RBP11.2□□□□□ -0.62
RAB40B-202ENST00000538809 AKR1C2P52895 323 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 AARDQ4LEZ3 155 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 PVRIGQ6DKI7 326 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 SPSB3Q6PJ21 355 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 RBPMS2Q6ZRY4 209 aaKnown RBP11.2□□□□□ -0.62
RAB40B-202ENST00000538809 OR51S1Q8NGJ8 323 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 PRRT1Q99946 306 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 NAA60Q9H7X0 242 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 DAZ1Q9NQZ3 744 aaKnown RBP11.2□□□□□ -0.62
RAB40B-202ENST00000538809 GAR1Q9NY12 217 aaKnown RBP11.2□□□□□ -0.62
RAB40B-202ENST00000538809 V9GYH0 126 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 RYR2Q92736 4967 aa11.2□□□□□ -0.62
RAB40B-202ENST00000538809 FABP12A6NFH5 140 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 CRYM-AS1A6NIL9 109 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 NDUFA4O00483 81 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 ST8SIA3O43173 380 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 ATG12O94817 140 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 TRIM16LQ309B1 348 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 Q6ZRM9 215 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 TRIM63Q969Q1 353 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 TMEM230Q96A57 120 aa11.19□□□□□ -0.62
RAB40B-202ENST00000538809 PINX1Q96BK5 328 aaKnown RBP11.19□□□□□ -0.62
RAB40B-202ENST00000538809 C14orf166Q9Y224 244 aaKnown RBP11.19□□□□□ -0.62
RAB40B-202ENST00000538809 TENM2Q9NT68 2774 aa11.18□□□□□ -0.62
RAB40B-202ENST00000538809 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
RAB40B-202ENST00000538809 TEX13DA0A0J9YY54 714 aaPredicted RBP11.18□□□□□ -0.62
RAB40B-202ENST00000538809 MT-CO2P00403 227 aa11.18□□□□□ -0.62
RAB40B-202ENST00000538809 CTSGP08311 255 aa11.18□□□□□ -0.62
RAB40B-202ENST00000538809 SLC35G3Q8N808 338 aa11.18□□□□□ -0.62
RAB40B-202ENST00000538809 UBQLN2Q9UHD9 624 aa11.18□□□□□ -0.62
RAB40B-202ENST00000538809 SACSQ9NZJ4 4579 aa11.18□□□□□ -0.62
RAB40B-202ENST00000538809 ZNF701M0R085 212 aaPredicted RBP11.17□□□□□ -0.62
RAB40B-202ENST00000538809 ERHP84090 104 aaKnown RBP11.17□□□□□ -0.62
RAB40B-202ENST00000538809 DHODHQ02127 395 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 KLF9Q13886 244 aaPredicted RBP11.17□□□□□ -0.62
RAB40B-202ENST00000538809 ZNF79Q15937 498 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 CCDC190Q86UF4 302 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 FAM219AQ8IW50 185 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 SELENOHQ8IZQ5 122 aaKnown RBP11.17□□□□□ -0.62
RAB40B-202ENST00000538809 RNASE11Q8TAA1 199 aaKnown RBP11.17□□□□□ -0.62
RAB40B-202ENST00000538809 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
RAB40B-202ENST00000538809 GALNT14Q96FL9 552 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 TXN2Q99757 166 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 TMEM56-RWDD3S4R434 201 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 LYSTQ99698 3801 aa11.17□□□□□ -0.62
RAB40B-202ENST00000538809 IGHV3-49A0A0A0MS15 119 aa11.16□□□□□ -0.62
RAB40B-202ENST00000538809 NUPL2O15504 423 aaKnown RBP11.16□□□□□ -0.62
RAB40B-202ENST00000538809 IFNA17P01571 189 aa11.16□□□□□ -0.62
RAB40B-202ENST00000538809 RNASE2P10153 161 aaKnown RBP11.16□□□□□ -0.62
RAB40B-202ENST00000538809 MFAP4P55083 255 aa11.16□□□□□ -0.62
RAB40B-202ENST00000538809 TMEM187Q14656 261 aa11.16□□□□□ -0.62
RAB40B-202ENST00000538809 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
RAB40B-202ENST00000538809 RRNAD1Q96FB5 475 aaKnown RBP11.16□□□□□ -0.62
RAB40B-202ENST00000538809 SPAG8Q99932 426 aaPredicted RBP11.16□□□□□ -0.62
RAB40B-202ENST00000538809 GGTLC1Q9BX51 225 aa11.16□□□□□ -0.62
RAB40B-202ENST00000538809 SCP2D1Q9UJQ7 156 aa11.16□□□□□ -0.62
RAB40B-202ENST00000538809 CCDC160A6NGH7 325 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 K7EMT4 169 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 TSPAN4O14817 238 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 GNG7O60262 68 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 YIF1AO95070 293 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 ETV6P41212 452 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 HOXA1P49639 335 aaPredicted RBP11.15□□□□□ -0.62
RAB40B-202ENST00000538809 SUPT4H1P63272 117 aaKnown RBP11.15□□□□□ -0.62
RAB40B-202ENST00000538809 RELQ04864 619 aaPredicted RBP11.15□□□□□ -0.62
RAB40B-202ENST00000538809 OR52E5Q8NH55 327 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 GPR146Q96CH1 333 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 PDCD10Q9BUL8 212 aa11.15□□□□□ -0.62
RAB40B-202ENST00000538809 LOC102724200A0A096LPH7 203 aaPredicted RBP11.14□□□□□ -0.63
RAB40B-202ENST00000538809 C15orf62A8K5M9 175 aa11.14□□□□□ -0.63
RAB40B-202ENST00000538809 SNCAP37840 140 aa11.14□□□□□ -0.63
RAB40B-202ENST00000538809 ODF3L2Q3SX64 289 aa11.14□□□□□ -0.63
RAB40B-202ENST00000538809 LAMTOR1Q6IAA8 161 aa11.14□□□□□ -0.63
RAB40B-202ENST00000538809 IL22RA2Q969J5 263 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms