RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	IGHV1-8	P0DP01	117 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	IFITM3	Q01628	133 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ZNF383	Q8NA42	475 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ALKBH7	Q9BT30	221 aa	Predicted RBP	13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	RNF114	Q9Y508	228 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TFF1	P04155	84 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	H2BFS	P57053	126 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	OR11H4	Q8NGC9	324 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	PLA2G2C	Q5R387	149 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	OR10AG1	Q8NH19	301 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	PARL	Q9H300	379 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	HEATR5B	Q9P2D3	2071 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TMEM250	H0YL14	139 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CIART	Q8N365	385 aa	Predicted RBP	13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	VN1R17P	Q8TDU5	208 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	MARVELD3	Q96A59	401 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	GPR61	Q9BZJ8	451 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	LINC00527	Q9UJ94	153 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ZNF257	Q9Y2Q1	563 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	DICER1	Q9UPY3	1922 aa	Known RBP	13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	SPTAN1	Q13813	2472 aa	Known RBP	13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	PEX7	O00628	323 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	LAIR2	Q6ISS4	152 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	C12orf54	Q6X4T0	127 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	MRPL18	Q9H0U6	180 aa	Known RBP	13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	GGCT	O75223	188 aa	Known RBP	13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ZNF585B	Q52M93	769 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TPTE2P1	Q5T6R2	138 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	NABP1	Q96AH0	204 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	FMC1	Q96HJ9	113 aa		13.07	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CGA	P01215	116 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TMEM200B	Q69YZ2	307 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	RNF5	Q99942	180 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	BRD3OS	Q6XYD6	125 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TMEM219	Q86XT9	240 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CD5	P06127	495 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	HBB	P68871	147 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	REC114	Q7Z4M0	266 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	NBAS	A2RRP1	2371 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	SBF1	O95248	1867 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	DIDO1	Q9BTC0	2240 aa	Known RBP	13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	F12	P00748	615 aa	Predicted RBP	13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	FAM169B	Q8N8A8	192 aa		13.06	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CD33	P20138	364 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	GATA3	P23771	443 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	DUT	P33316	252 aa	Known RBP	13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532		Q5PR19	223 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	BPESC1	Q9GZL8	116 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ZNF319	Q9P2F9	582 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	HINT1	P49773	126 aa	Predicted RBP	13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TFF3	Q07654	80 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	IGFL3	Q6UXB1	125 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	OR10S1	Q8NGN2	331 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	RCC1L	Q96I51	464 aa	Known RBP	13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	OR4D5	Q8NGN0	318 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ASCL2	Q99929	193 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CACNA1H	O95180	2353 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	DPRX	A6NFQ7	191 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	MDK	P21741	143 aa	Predicted RBP	13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	PRCD	Q00LT1	54 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	C3orf36	Q3SXR2	165 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	DTX2	Q86UW9	622 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	C2orf88	Q9BSF0	95 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532		Q9H3A6	140 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	RNF223	E7ERA6	249 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	PRSS33	Q8NF86	280 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	SFRP2	Q96HF1	295 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	OTOR	Q9NRC9	128 aa		13.05	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TRBV9	A0A0B4J1U6	114 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	SHISA3	A0PJX4	238 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TMEM155	Q4W5P6	130 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	PRR30	Q53SZ7	412 aa	Predicted RBP	13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TBL2	Q9Y4P3	447 aa	Known RBP	13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532		H3BVH4	76 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TCTA	P57738	103 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	KLRD1	Q13241	179 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	RARRES2	Q99969	163 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CHD5	Q8TDI0	1954 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	LILRA1	O75019	489 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	NMB	P08949	121 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CD7	P09564	240 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	THSD7B	Q9C0I4	1608 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	IGKV1D-13	A0A0B4J2D9	117 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CD8A	P01732	235 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	IGKV1-13	P0DP09	117 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ZNF250	P15622	560 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	GAS1	P54826	345 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TEX38	Q6PEX7	206 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	LRTM2	Q8N967	370 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	SMIM12	Q96EX1	92 aa		13.04	□□□□□ -0.32
NCAPD3-213	ENST00000534532	FAM90A9P	A6NNJ1	464 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532		Q6AWC8	147 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	UBE2DNL	Q8IWF7	75 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	FAM89B	Q8N5H3	189 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TRGV4	A0A0C4DH28	118 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms