RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PDCD10Q9BUL8 212 aa14.45□□□□□ -0.1
CAPN1-211ENST00000527739 HIPK2Q9H2X6 1198 aa14.45□□□□□ -0.1
CAPN1-211ENST00000527739 DISC1C4P0D8 188 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 MT-CO2P00403 227 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 ADMP35318 185 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 SNCAP37840 140 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 MRPS10P82664 201 aaKnown RBP14.44□□□□□ -0.1
CAPN1-211ENST00000527739 MEF2DQ14814 521 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 LAMTOR1Q6IAA8 161 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 RRNAD1Q96FB5 475 aaKnown RBP14.44□□□□□ -0.1
CAPN1-211ENST00000527739 ATP6V0BQ99437 205 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 C6orf62Q9GZU0 229 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-211ENST00000527739 C5orf66Q9H5L9 145 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 EDA2RQ9HAV5 297 aa14.44□□□□□ -0.1
CAPN1-211ENST00000527739 C14orf166Q9Y224 244 aaKnown RBP14.44□□□□□ -0.1
CAPN1-211ENST00000527739 A0A0B4J293 547 aa14.43□□□□□ -0.1
CAPN1-211ENST00000527739 TEX13DA0A0J9YY54 714 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-211ENST00000527739 F8W735 103 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-211ENST00000527739 CTSDP07339 412 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-211ENST00000527739 CTSGP08311 255 aa14.43□□□□□ -0.1
CAPN1-211ENST00000527739 TMBIM6P55061 237 aa14.43□□□□□ -0.1
CAPN1-211ENST00000527739 RELQ04864 619 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-211ENST00000527739 ENY2Q9NPA8 101 aa14.43□□□□□ -0.1
CAPN1-211ENST00000527739 I3L2K1 104 aa14.42□□□□□ -0.1
CAPN1-211ENST00000527739 ST8SIA3O43173 380 aa14.42□□□□□ -0.1
CAPN1-211ENST00000527739 GNG7O60262 68 aa14.42□□□□□ -0.1
CAPN1-211ENST00000527739 ETV6P41212 452 aa14.42□□□□□ -0.1
CAPN1-211ENST00000527739 HOXA1P49639 335 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-211ENST00000527739 SSBP1Q04837 148 aaKnown RBP14.42□□□□□ -0.1
CAPN1-211ENST00000527739 DYNC2LI1Q8TCX1 351 aa14.42□□□□□ -0.1
CAPN1-211ENST00000527739 SMIM4Q8WVI0 70 aa14.42□□□□□ -0.1
CAPN1-211ENST00000527739 CCDC59Q9P031 241 aaKnown RBP14.42□□□□□ -0.1
CAPN1-211ENST00000527739 UBQLN2Q9UHD9 624 aa14.42□□□□□ -0.1
CAPN1-211ENST00000527739 K7EMT4 169 aa14.41□□□□□ -0.1
CAPN1-211ENST00000527739 ZNF114Q8NC26 417 aa14.41□□□□□ -0.1
CAPN1-211ENST00000527739 TXN2Q99757 166 aa14.41□□□□□ -0.1
CAPN1-211ENST00000527739 SPAG8Q99932 426 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-211ENST00000527739 LOC102724200A0A096LPH7 203 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-211ENST00000527739 IGHV3-49A0A0A0MS15 119 aa14.4□□□□□ -0.1
CAPN1-211ENST00000527739 LCE6AA0A183 80 aa14.4□□□□□ -0.1
CAPN1-211ENST00000527739 OR5AC1P0C628 307 aa14.4□□□□□ -0.1
CAPN1-211ENST00000527739 AKAIN1P0CW23 69 aa14.4□□□□□ -0.1
CAPN1-211ENST00000527739 UCP1P25874 307 aa14.4□□□□□ -0.1
CAPN1-211ENST00000527739 RPL5P46777 297 aaKnown RBP14.4□□□□□ -0.1
CAPN1-211ENST00000527739 SUB1P53999 127 aaKnown RBP eCLIP14.4□□□□□ -0.1
CAPN1-211ENST00000527739 DUSP18Q8NEJ0 188 aa14.4□□□□□ -0.1
CAPN1-211ENST00000527739 GGTLC1Q9BX51 225 aa14.4□□□□□ -0.1
CAPN1-211ENST00000527739 HYDINQ4G0P3 5121 aa14.4□□□□□ -0.1
CAPN1-211ENST00000527739 C15orf62A8K5M9 175 aa14.39□□□□□ -0.11
CAPN1-211ENST00000527739 TSPAN4O14817 238 aa14.39□□□□□ -0.11
CAPN1-211ENST00000527739 B3GALNT1O75752 331 aa14.39□□□□□ -0.11
CAPN1-211ENST00000527739 TMEM116Q8NCL8 245 aa14.39□□□□□ -0.11
CAPN1-211ENST00000527739 OR4C16Q8NGL9 310 aa14.39□□□□□ -0.11
CAPN1-211ENST00000527739 BCL7BQ9BQE9 202 aa14.39□□□□□ -0.11
CAPN1-211ENST00000527739 RTBDNQ9BSG5 229 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-211ENST00000527739 RABL2AQ9UBK7 228 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-211ENST00000527739 SMPXQ9UHP9 88 aa14.39□□□□□ -0.11
CAPN1-211ENST00000527739 RABL2BQ9UNT1 228 aa14.39□□□□□ -0.11
CAPN1-211ENST00000527739 IGKV3-7A0A075B6H7 116 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 IGHV3OR16-13A0A075B7E8 117 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 IGHV3-74A0A0B4J1X5 117 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 A0A0G2JRQ6 117 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 CTDSPLO15194 276 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 P0C879 139 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 NPBWR1P48145 328 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 OR51S1Q8NGJ8 323 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 RHPN1-AS1Q9BWJ2 59 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 NXF2Q9GZY0 626 aaKnown RBP14.38□□□□□ -0.11
CAPN1-211ENST00000527739 TMEM222Q9H0R3 208 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 NAA60Q9H7X0 242 aa14.38□□□□□ -0.11
CAPN1-211ENST00000527739 RSL24D1Q9UHA3 163 aaKnown RBP14.38□□□□□ -0.11
CAPN1-211ENST00000527739 TRAV14DV4A0A0A6YYC5 116 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 IGHV7-4-1A0A0J9YVY3 117 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 OR4C46A6NHA9 309 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 FCGR2BP31994 310 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-211ENST00000527739 TFPI2P48307 235 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 DHODHQ02127 395 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 SURF2Q15527 256 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-211ENST00000527739 MCFD2Q8NI22 146 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 RNF2Q99496 336 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 PRRT1Q99946 306 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 MCUBQ9NWR8 336 aa14.37□□□□□ -0.11
CAPN1-211ENST00000527739 FABP12A6NFH5 140 aa14.36□□□□□ -0.11
CAPN1-211ENST00000527739 H3BMQ9 156 aa14.36□□□□□ -0.11
CAPN1-211ENST00000527739 CHEK1O14757 476 aa14.36□□□□□ -0.11
CAPN1-211ENST00000527739 CDS2O95674 445 aa14.36□□□□□ -0.11
CAPN1-211ENST00000527739 TMEM268Q5VZI3 342 aa14.36□□□□□ -0.11
CAPN1-211ENST00000527739 Q6ZRM9 215 aa14.36□□□□□ -0.11
CAPN1-211ENST00000527739 SELENOHQ8IZQ5 122 aaKnown RBP14.36□□□□□ -0.11
CAPN1-211ENST00000527739 GLYATL2Q8WU03 294 aa14.36□□□□□ -0.11
CAPN1-211ENST00000527739 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-211ENST00000527739 GPR132Q9UNW8 380 aa14.36□□□□□ -0.11
CAPN1-211ENST00000527739 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
CAPN1-211ENST00000527739 RNASE2P10153 161 aaKnown RBP14.35□□□□□ -0.11
CAPN1-211ENST00000527739 TNFSF8P32971 234 aa14.35□□□□□ -0.11
CAPN1-211ENST00000527739 OPRK1P41145 380 aa14.35□□□□□ -0.11
CAPN1-211ENST00000527739 FAM219AQ8IW50 185 aa14.35□□□□□ -0.11
CAPN1-211ENST00000527739 LHFPL5Q8TAF8 219 aa14.35□□□□□ -0.11
CAPN1-211ENST00000527739 RBPMSQ93062 196 aaKnown RBP14.35□□□□□ -0.11
CAPN1-211ENST00000527739 GINS3Q9BRX5 216 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms