RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 DMRTA2Q96SC8 542 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 CEP295Q9C0D2 2601 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 TEX50A0A1B0GTY4 177 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 GPR183P32249 361 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 CBLN2Q8IUK8 224 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 TMEM18Q96B42 140 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 ZNF586Q9NXT0 402 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 BRCA2P51587 3418 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 MKI67P46013 3256 aaKnown RBP12.37□□□□□ -0.43
USP47-207ENST00000527733 WISP2O76076 250 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 PRSS8Q16651 343 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 TM4SF20Q53R12 229 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 TEX36Q5VZQ5 186 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 EBLN2Q6P2I7 272 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 GBGT1Q8N5D6 347 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 Q8NA96 180 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 PRSS22Q9GZN4 317 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 ANAPC10Q9UM13 185 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 IGHV3-23P01764 117 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 OR10J6PQ8NGY7 276 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 RNF166Q96A37 237 aaPredicted RBP12.37□□□□□ -0.43
USP47-207ENST00000527733 H0YJW9 148 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 WNT2P09544 360 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 PSG9Q00887 426 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 ZNF738Q8NE65 137 aa12.37□□□□□ -0.43
USP47-207ENST00000527733 MFSD2BA6NFX1 497 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 RAB5AP20339 215 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 CD69Q07108 199 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 F5H697 171 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 FA2HQ7L5A8 372 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 TMEM167AQ8TBQ9 72 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 SHISA9B4DS77 424 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 C10orf55Q5SWW7 151 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 FAM71F2Q6NXP2 309 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 RARRES2Q99969 163 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 H3BTX0 84 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 KRTAP27-1Q3LI81 207 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 DOPEY2Q9Y3R5 2298 aa12.36□□□□□ -0.43
USP47-207ENST00000527733 TRAV20A0A0B4J274 112 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 NPFFO15130 113 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 SIAH2O43255 324 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 RIGQ13278 110 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 TMEM177Q53S58 311 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 Q8NFD4 153 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 IGHV3OR16-13A0A075B7E8 117 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 IGHV3-74A0A0B4J1X5 117 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 CRYBB3P26998 211 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 OR4X2Q8NGF9 303 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 NOL4LQ96MY1 436 aaPredicted RBP12.35□□□□□ -0.43
USP47-207ENST00000527733 TBL2Q9Y4P3 447 aaKnown RBP12.35□□□□□ -0.43
USP47-207ENST00000527733 AP4M1O00189 453 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 NBEAP1P0C6P0 100 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 HOXA4Q00056 320 aaPredicted RBP12.35□□□□□ -0.43
USP47-207ENST00000527733 OR10W1Q8NGF6 305 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 MOB4Q9Y3A3 225 aa12.35□□□□□ -0.43
USP47-207ENST00000527733 NCOA6Q14686 2063 aaPredicted RBP12.35□□□□□ -0.43
USP47-207ENST00000527733 TMEM250H0YL14 139 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 AGAP20933 346 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 GATA2P23769 480 aaPredicted RBP12.34□□□□□ -0.43
USP47-207ENST00000527733 CLEC19AQ6UXS0 136 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 YLPM1P49750 1951 aaKnown RBP12.34□□□□□ -0.43
USP47-207ENST00000527733 A8MWL6 223 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 BRD3OSQ6XYD6 125 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 Q6ZSR3 168 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 SGMS2Q8NHU3 365 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 WDR83OSQ9Y284 106 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 TMSB15BA0A087X1C1 80 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 HTN1P15515 57 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 LOXP28300 417 aaPredicted RBP12.34□□□□□ -0.43
USP47-207ENST00000527733 JMJD8Q96S16 334 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 ABCA1O95477 2261 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 LINC00205P59089 165 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
USP47-207ENST00000527733 CLDND2Q8NHS1 167 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 TMPRSS5Q9H3S3 457 aa12.34□□□□□ -0.43
USP47-207ENST00000527733 UFC1Q9Y3C8 167 aa12.33□□□□□ -0.44
USP47-207ENST00000527733 RHOGP84095 191 aa12.33□□□□□ -0.44
USP47-207ENST00000527733 LINC01356Q8N9X3 169 aa12.33□□□□□ -0.44
USP47-207ENST00000527733 IGHV3-11P01762 117 aa12.33□□□□□ -0.44
USP47-207ENST00000527733 C5orf64Q2M2E5 130 aa12.33□□□□□ -0.44
USP47-207ENST00000527733 DUX4L9Q6RFH8 374 aaPredicted RBP12.33□□□□□ -0.44
USP47-207ENST00000527733 OR1P1Q8NH06 330 aa12.33□□□□□ -0.44
USP47-207ENST00000527733 ZNF506Q5JVG8 444 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 PUSL1Q8N0Z8 303 aaKnown RBP12.32□□□□□ -0.44
USP47-207ENST00000527733 SRD5A3Q9H8P0 318 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 TRAV3A0A0B4J244 114 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 LOC102723971A0A1B0GUV8 181 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 PLA2G5P39877 138 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 RPL29P47914 159 aaKnown RBP12.32□□□□□ -0.44
USP47-207ENST00000527733 ADORA2A-AS1P86434 159 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 RELBQ01201 579 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 DMRTC2Q8IXT2 367 aaPredicted RBP12.32□□□□□ -0.44
USP47-207ENST00000527733 IGHV3-49A0A0A0MS15 119 aa12.32□□□□□ -0.44
USP47-207ENST00000527733 H3BUX3 64 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms