RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 HIST2H2BEQ16778 126 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 SPANXN3Q5MJ09 141 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.21□□□□□ -2.22
SQLE-202ENST00000518604 C10orf55Q5SWW7 151 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST2H3PS2Q5TEC6 136 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 AADACL3Q5VUY0 350 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 S100A7AQ86SG5 101 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 TRAPPC5Q8IUR0 188 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 C20orf196Q8IYI0 205 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 KRT222Q8N1A0 295 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 ZNF439Q8NDP4 499 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 OR51D1Q8NGF3 324 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 OR13C4Q8NGS5 318 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 OR2T4Q8NH00 348 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST1H2BHQ93079 126 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 DGCR14Q96DF8 476 aaKnown RBP1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST1H2BNQ99877 126 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST1H2BMQ99879 126 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.21□□□□□ -2.22
SQLE-202ENST00000518604 WRNQ14191 1432 aaPredicted RBP eCLIP1.21□□□□□ -2.22
SQLE-202ENST00000518604 CLDN24A6NM45 220 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 CD79AP11912 226 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 SULT1A1P50225 295 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 SPCS3P61009 180 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 B2MP61769 119 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 BASP1P80723 227 aaKnown RBP1.2□□□□□ -2.22
SQLE-202ENST00000518604 PLCXD2Q0VAA5 305 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 AAED1Q7RTV5 226 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 DEFB128Q7Z7B8 93 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 CLDN22Q8N7P3 220 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 C12orf29Q8N999 325 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 TMEM106AQ96A25 262 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 SCGB3A1Q96QR1 104 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 PRTFDC1Q9NRG1 225 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 GREB1Q4ZG55 1949 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 MED13Q9UHV7 2174 aa1.2□□□□□ -2.22
SQLE-202ENST00000518604 TTC21AQ8NDW8 1320 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 HECW1Q76N89 1606 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 A0A087WUJ7 227 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 IGKV1-5P01602 117 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 TNNC2P02585 160 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 SHBGP04278 402 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 UBBP0CG47 229 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 OMPP47874 163 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 ARF6P62330 175 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 SPOPLQ6IQ16 392 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 OR6V1Q8N148 313 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 SERPINI1Q99574 410 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 COMMD5Q9GZQ3 224 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 OR5AC2Q9NZP5 309 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 CKLFQ9UBR5 152 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 EIF3AQ14152 1382 aaKnown RBP1.19□□□□□ -2.22
SQLE-202ENST00000518604 MTUS2Q5JR59 1369 aa1.19□□□□□ -2.22
SQLE-202ENST00000518604 MYH11P35749 1972 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 PIK3C2GO75747 1445 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 TMEM238C9JI98 176 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 SULT1B1O43704 296 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 HLA-DRB1P01911 266 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 NEFHP12036 1026 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 HIST1H1TP22492 207 aaPredicted RBP1.18□□□□□ -2.22
SQLE-202ENST00000518604 SNRPD2P62316 118 aaKnown RBP1.18□□□□□ -2.22
SQLE-202ENST00000518604 SURF2Q15527 256 aaPredicted RBP1.18□□□□□ -2.22
SQLE-202ENST00000518604 TAF1AQ15573 450 aaPredicted RBP1.18□□□□□ -2.22
SQLE-202ENST00000518604 ACOT6Q3I5F7 207 aaPredicted RBP1.18□□□□□ -2.22
SQLE-202ENST00000518604 LPCAT3Q6P1A2 487 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.18□□□□□ -2.22
SQLE-202ENST00000518604 ZNF826PQ6ZT77 177 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 WFDC11Q8NEX6 87 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 OR4D11Q8NGI4 311 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 PFN4Q8NHR9 129 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 KLK6Q92876 244 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 CMTM6Q9NX76 183 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 IDI2-AS1Q9NZ38 188 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 MRPL27Q9P0M9 148 aaKnown RBP1.18□□□□□ -2.22
SQLE-202ENST00000518604 VPS29Q9UBQ0 182 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 PKIGQ9Y2B9 76 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 STRCQ7RTU9 1775 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 NUP155O75694 1391 aa1.18□□□□□ -2.22
SQLE-202ENST00000518604 NCOA1Q15788 1441 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 TOPBP1Q92547 1522 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 IGKV2D-26A0A0A0MRZ7 120 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 HCRTO43612 131 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 CNIH1O95406 144 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 SERPINA1P01009 418 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 HTR1AP08908 422 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 CST2P09228 141 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 GNG10P50151 68 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 SERPINB9P50453 376 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 HBA1P69905 142 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 CDK10Q15131 360 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 KISS1Q15726 138 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 DHRS4L2Q6PKH6 230 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 LCN15Q6UWW0 184 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 LYG2Q86SG7 212 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 OR10X1Q8NGY0 326 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 PPP1R2P1Q96PQ5 205 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 NIPSNAP1Q9BPW8 284 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 DCSTAMPQ9H295 470 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 FBXL12Q9NXK8 326 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 GLTPQ9NZD2 209 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms