RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 DEFB108BQ8NET1 73 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 VAMP8Q9BV40 100 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 OSTCQ9NRP0 149 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 ZNF586Q9NXT0 402 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 LINC00312Q9Y6C7 94 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 DLEU1O43261 78 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 FSTL3O95633 263 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 OR5G3P0C626 314 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 UBE2G2P60604 165 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 TEPPQ6URK8 271 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 OR5T1Q8NG75 326 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 OCC1Q8TAD7 63 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 ADTRPQ96IZ2 230 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 SLC35E1Q96K37 410 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 MGST2Q99735 147 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 IDI2-AS1Q9NZ38 188 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 SLC45A2Q9UMX9 530 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 ICE1Q9Y2F5 2266 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 CACNA1DQ01668 2161 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 SPTBN1Q01082 2364 aaKnown RBP14.94□□□□□ -0.02
SDC2-202ENST00000518385 LINC00473A8K010 186 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 ZNF672Q499Z4 452 aaPredicted RBP14.94□□□□□ -0.02
SDC2-202ENST00000518385 RASL11AQ6T310 242 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 TOMM20LQ6UXN7 152 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 RNF2Q99496 336 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 GAL3ST2Q9H3Q3 398 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 DCAF16Q9NXF7 216 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 KAAG1Q9UBP8 84 aa14.94□□□□□ -0.02
SDC2-202ENST00000518385 ADGRG4Q8IZF6 3080 aa14.93□□□□□ -0.02
SDC2-202ENST00000518385 ANKHD1Q8IWZ3 2542 aaKnown RBP14.93□□□□□ -0.02
SDC2-202ENST00000518385 DSCAMO60469 2012 aa14.93□□□□□ -0.02
SDC2-202ENST00000518385 C19orf84I3L1E1 186 aa14.93□□□□□ -0.02
SDC2-202ENST00000518385 TNFRSF13BO14836 293 aaPredicted RBP14.93□□□□□ -0.02
SDC2-202ENST00000518385 OR9G9P0C7N8 305 aa14.93□□□□□ -0.02
SDC2-202ENST00000518385 IGFBP2P18065 325 aa14.93□□□□□ -0.02
SDC2-202ENST00000518385 BRS3P32247 399 aa14.93□□□□□ -0.02
SDC2-202ENST00000518385 ZNF705AQ6ZN79 300 aaPredicted RBP14.93□□□□□ -0.02
SDC2-202ENST00000518385 OR1L6Q8NGR2 347 aa14.93□□□□□ -0.02
SDC2-202ENST00000518385 OR4S2Q8NH73 311 aa14.93□□□□□ -0.02
SDC2-202ENST00000518385 EAF1Q96JC9 268 aaPredicted RBP14.93□□□□□ -0.02
SDC2-202ENST00000518385 SCO2A0A1W2PP80 73 aa14.92□□□□□ -0.02
SDC2-202ENST00000518385 FAM53AQ6NSI3 398 aaPredicted RBP14.92□□□□□ -0.02
SDC2-202ENST00000518385 BAGE3Q86Y29 109 aa14.92□□□□□ -0.02
SDC2-202ENST00000518385 BAGE2Q86Y30 109 aa14.92□□□□□ -0.02
SDC2-202ENST00000518385 FAM216BQ8N7L0 139 aa14.92□□□□□ -0.02
SDC2-202ENST00000518385 SIGLECL1Q8N7X8 197 aa14.92□□□□□ -0.02
SDC2-202ENST00000518385 S1PR3Q99500 378 aa14.92□□□□□ -0.02
SDC2-202ENST00000518385 IFI27L2Q9H2X8 130 aa14.92□□□□□ -0.02
SDC2-202ENST00000518385 FOXA2Q9Y261 457 aaPredicted RBP14.92□□□□□ -0.02
SDC2-202ENST00000518385 TRBV20OR9-2A0A075B6H5 130 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 IL6RP08887 468 aaPredicted RBP14.91□□□□□ -0.02
SDC2-202ENST00000518385 RPL31P62899 125 aaKnown RBP14.91□□□□□ -0.02
SDC2-202ENST00000518385 RELBQ01201 579 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 POU2AF1Q16633 256 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 LTC4SQ16873 150 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 Q6ZWC4 215 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 ZNF114Q8NC26 417 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 CCL17Q92583 94 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 DERL1Q9BUN8 251 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 SAMD10Q9BYL1 202 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 PATZ1Q9HBE1 687 aaKnown RBP14.91□□□□□ -0.02
SDC2-202ENST00000518385 ENY2Q9NPA8 101 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 GOLT1BQ9Y3E0 138 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 CBY1Q9Y3M2 126 aa14.91□□□□□ -0.02
SDC2-202ENST00000518385 FCN1O00602 326 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 NDUFB3O43676 98 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 HLA-DQA1P01909 254 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 ZNF25P17030 456 aaPredicted RBP14.9□□□□□ -0.02
SDC2-202ENST00000518385 TAS2R45P59539 299 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 CX3CL1P78423 397 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 LRRC10Q5BKY1 277 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 COL5A1-AS1Q5SY13 56 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 PQLC2Q6ZP29 291 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 C19orf35Q6ZS72 473 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 MMD2Q8IY49 270 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 HSPB9Q9BQS6 159 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 RPUSD1Q9UJJ7 312 aaKnown RBP14.9□□□□□ -0.02
SDC2-202ENST00000518385 TCF19Q9Y242 345 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 ROS1P08922 2347 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 DSCAML1Q8TD84 2053 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 IGHV1-69-2A0A0G2JMI3 117 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 C15orf61A6NNL5 157 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 ISLRO14498 428 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 FCGR3BO75015 233 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 PROP1O75360 226 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 SERF1AO75920 110 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 THBS3P49746 956 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 PPOXP50336 477 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 ZNF134P52741 427 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 PRR20EP86478 221 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 PRR20CP86479 221 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 PRR20DP86480 221 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 PRR20BP86481 221 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 PRR20AP86496 221 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 HLA-DRB5Q30154 266 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 MIC13Q5XKP0 118 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 TCF23Q7RTU1 214 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 ZCCHC24Q8N2G6 241 aaKnown RBP14.9□□□□□ -0.02
SDC2-202ENST00000518385 ZNF439Q8NDP4 499 aa14.9□□□□□ -0.02
SDC2-202ENST00000518385 TP53TG3Q9ULZ0 132 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms