RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SELENOTP62341 195 aa8.99□□□□□ -0.97
SH3RF1-203ENST00000508685 CLEC12BQ2HXU8 276 aa8.99□□□□□ -0.97
SH3RF1-203ENST00000508685 GCSAMLQ5JQS6 135 aa8.99□□□□□ -0.97
SH3RF1-203ENST00000508685 TEX38Q6PEX7 206 aa8.99□□□□□ -0.97
SH3RF1-203ENST00000508685 FKBP11Q9NYL4 201 aa8.99□□□□□ -0.97
SH3RF1-203ENST00000508685 SLC45A2Q9UMX9 530 aa8.99□□□□□ -0.97
SH3RF1-203ENST00000508685 FLNCQ14315 2725 aa8.99□□□□□ -0.97
SH3RF1-203ENST00000508685 PPIAL4EA0A075B759 164 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 PPIAL4DF5H284 164 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 PPIAL4FP0DN26 164 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 OR10J1P30954 320 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 EFNB3Q15768 340 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 LYPD2Q6UXB3 125 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 ABHD12Q8N2K0 398 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 OCC1Q8TAD7 63 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 SLC35E1Q96K37 410 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 PPIAL4AQ9Y536 164 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 VPS13CQ709C8 3753 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 NKX6-3A6NJ46 265 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 B9A039 149 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 ESDP10768 282 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 ZNF90Q03938 601 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 CT45A1Q5HYN5 189 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 MUC15Q8N387 334 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 PNKDQ8N490 385 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 STPG3Q8N7X2 389 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 CT45A3Q8NHU0 189 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 ZNRD1Q9P1U0 126 aa8.98□□□□□ -0.97
SH3RF1-203ENST00000508685 SAA2-SAA4A0A096LPE2 208 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 IGHV1-69-2A0A0G2JMI3 117 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 LYNX1G3V0Z9 82 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 SAA2P0DJI9 122 aaPredicted RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 LYNX1P0DP58 116 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 GNG10P50151 68 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 RANP62826 216 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 RPL31P62899 125 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 MRPS11P82912 194 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 PRR20EP86478 221 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 PRR20CP86479 221 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 PRR20DP86480 221 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 PRR20BP86481 221 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 PRR20AP86496 221 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 OR4A47Q6IF82 309 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 DERL1Q9BUN8 251 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 LINC00574Q9H8X3 128 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 CTSZQ9UBR2 303 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 YLPM1P49750 1951 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 OR10J4P0C629 311 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 DEFA4P12838 97 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 CCL3L1P16619 93 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 UQCRFS1P47985 274 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 TPPP2P59282 170 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 TAS2R45P59539 299 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 ERVFC1-1P60608 527 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 ZNF672Q499Z4 452 aaPredicted RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 ARSJQ5FYB0 599 aaPredicted RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 C1orf194Q5T5A4 169 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 MS4A10Q96PG2 267 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 RNF2Q99496 336 aa8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 TECRQ9NZ01 308 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 YTHDF2Q9Y5A9 579 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-203ENST00000508685 HCFC1P51610 2035 aa8.96□□□□□ -0.97
SH3RF1-203ENST00000508685 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 TRAV3A0A0B4J244 114 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 hADV38S2A0JD32 116 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 SCGB1D1O95968 90 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 CA2P00918 260 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 MT-ND6P03923 174 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 LOXP28300 417 aaPredicted RBP8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 RPEL1Q2QD12 228 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 WDR73Q6P4I2 378 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 PQLC2Q6ZP29 291 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 VKORC1L1Q8N0U8 176 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 ZNF114Q8NC26 417 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 ZNF439Q8NDP4 499 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 CMTM2Q8TAZ6 248 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 SSMEM1Q8WWF3 244 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 H1FXQ92522 213 aaKnown RBP8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 PLEKHA3Q9HB20 300 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 IDI2-AS1Q9NZ38 188 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 NAGKQ9UJ70 344 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 OR51B2Q9Y5P1 312 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 LINC00312Q9Y6C7 94 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 UBR5O95071 2799 aaPredicted RBP8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 TENM4Q6N022 2769 aa8.96□□□□□ -0.98
SH3RF1-203ENST00000508685 A0A1B0GV90 55 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 TNFRSF13BO14836 293 aaPredicted RBP8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 PRCDQ00LT1 54 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 Q0VG73 95 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 LYG1Q8N1E2 194 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 OR4P4Q8NGL7 312 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 C1orf159Q96HA4 380 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 EAF1Q96JC9 268 aaPredicted RBP8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 GNB1LQ9BYB4 327 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 SEPSECSQ9HD40 501 aaKnown RBP8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 HELTA6NFD8 242 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 J3QR06 171 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 UPK2O00526 184 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms