RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 MRPL27Q9P0M9 148 aaKnown RBP15.39■□□□□ 0.05
HDAC4-209ENST00000487617 CRYM-AS1A6NIL9 109 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 I3L2K1 104 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 NDUFA4O00483 81 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 CDS2O95674 445 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 MT-CO2P00403 227 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 C8orf88P0DMB2 117 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 ADMP35318 185 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 SNCAP37840 140 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 ETV6P41212 452 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 HOXA1P49639 335 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-209ENST00000487617 MFAP4P55083 255 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 DHODHQ02127 395 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 PYDC2Q56P42 97 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 RBPMSQ93062 196 aaKnown RBP15.38■□□□□ 0.05
HDAC4-209ENST00000487617 TM2D3Q9BRN9 247 aa15.38■□□□□ 0.05
HDAC4-209ENST00000487617 NUPL2O15504 423 aaKnown RBP15.37■□□□□ 0.05
HDAC4-209ENST00000487617 SCAF4O95104 1147 aaKnown RBP15.37■□□□□ 0.05
HDAC4-209ENST00000487617 IGHV3-48P01763 117 aa15.37■□□□□ 0.05
HDAC4-209ENST00000487617 S100A5P33763 92 aa15.37■□□□□ 0.05
HDAC4-209ENST00000487617 FAM219AQ8IW50 185 aa15.37■□□□□ 0.05
HDAC4-209ENST00000487617 SELENOHQ8IZQ5 122 aaKnown RBP15.37■□□□□ 0.05
HDAC4-209ENST00000487617 LHFPL5Q8TAF8 219 aa15.37■□□□□ 0.05
HDAC4-209ENST00000487617 SCGB3A2Q96PL1 93 aa15.37■□□□□ 0.05
HDAC4-209ENST00000487617 TXN2Q99757 166 aa15.37■□□□□ 0.05
HDAC4-209ENST00000487617 C20orf24Q9BUV8 137 aa15.37■□□□□ 0.05
HDAC4-209ENST00000487617 RBM38Q9H0Z9 239 aaKnown RBP15.37■□□□□ 0.05
HDAC4-209ENST00000487617 ENY2Q9NPA8 101 aa15.37■□□□□ 0.05
HDAC4-209ENST00000487617 DAZ1Q9NQZ3 744 aaKnown RBP15.37■□□□□ 0.05
HDAC4-209ENST00000487617 INS-IGF2F8WCM5 200 aa15.36■□□□□ 0.05
HDAC4-209ENST00000487617 CTSGP08311 255 aa15.36■□□□□ 0.05
HDAC4-209ENST00000487617 HAGHQ16775 308 aa15.36■□□□□ 0.05
HDAC4-209ENST00000487617 Q6ZRM9 215 aa15.36■□□□□ 0.05
HDAC4-209ENST00000487617 RBPMS2Q6ZRY4 209 aaKnown RBP15.36■□□□□ 0.05
HDAC4-209ENST00000487617 SLC16A13Q7RTY0 426 aa15.36■□□□□ 0.05
HDAC4-209ENST00000487617 DEFB125Q8N687 156 aa15.36■□□□□ 0.05
HDAC4-209ENST00000487617 IGHV3OR16-8A0A075B7F1 116 aa15.35■□□□□ 0.05
HDAC4-209ENST00000487617 OR11H12B2RN74 326 aa15.35■□□□□ 0.05
HDAC4-209ENST00000487617 FCGR2BP31994 310 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-209ENST00000487617 SUB1P53999 127 aaKnown RBP eCLIP15.35■□□□□ 0.05
HDAC4-209ENST00000487617 RELQ04864 619 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-209ENST00000487617 TMEM268Q5VZI3 342 aa15.35■□□□□ 0.05
HDAC4-209ENST00000487617 WFDC10AQ9H1F0 79 aa15.35■□□□□ 0.05
HDAC4-209ENST00000487617 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-209ENST00000487617 KCNIP3Q9Y2W7 256 aa15.35■□□□□ 0.05
HDAC4-209ENST00000487617 V9GYH0 126 aa15.35■□□□□ 0.05
HDAC4-209ENST00000487617 TRAV25A0A0B4J276 109 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 ZNF207O43670 478 aaKnown RBP15.34■□□□□ 0.05
HDAC4-209ENST00000487617 GNG7O60262 68 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 FAUP35544 74 aaKnown RBP15.34■□□□□ 0.05
HDAC4-209ENST00000487617 AP3S2P59780 193 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 OR52B4Q8NGK2 314 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 TRIM63Q969Q1 353 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 TMEM230Q96A57 120 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 SPATA25Q9BR10 227 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 SRD5A3Q9H8P0 318 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 CACNG5Q9UF02 275 aa15.34■□□□□ 0.05
HDAC4-209ENST00000487617 K7EMT4 169 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 YIF1AO95070 293 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 RNASE2P10153 161 aaKnown RBP15.33■□□□□ 0.04
HDAC4-209ENST00000487617 AKR1C4P17516 323 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 SPCS3P61009 180 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 KLF9Q13886 244 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-209ENST00000487617 ANKRD55Q3KP44 614 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 TOMM5Q8N4H5 51 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 DUSP18Q8NEJ0 188 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 GPR146Q96CH1 333 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 PRR13Q9NZ81 148 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 TMEM56-RWDD3S4R434 201 aa15.33■□□□□ 0.04
HDAC4-209ENST00000487617 C15orf62A8K5M9 175 aa15.32■□□□□ 0.04
HDAC4-209ENST00000487617 ZNF701M0R085 212 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-209ENST00000487617 TMEM187Q14656 261 aa15.32■□□□□ 0.04
HDAC4-209ENST00000487617 ZNF79Q15937 498 aa15.32■□□□□ 0.04
HDAC4-209ENST00000487617 AARDQ4LEZ3 155 aa15.32■□□□□ 0.04
HDAC4-209ENST00000487617 PVRIGQ6DKI7 326 aa15.32■□□□□ 0.04
HDAC4-209ENST00000487617 OR52E5Q8NH55 327 aa15.32■□□□□ 0.04
HDAC4-209ENST00000487617 GALNT14Q96FL9 552 aa15.32■□□□□ 0.04
HDAC4-209ENST00000487617 CORTO00230 105 aa15.31■□□□□ 0.04
HDAC4-209ENST00000487617 NPBWR1P48145 328 aa15.31■□□□□ 0.04
HDAC4-209ENST00000487617 LAMTOR1Q6IAA8 161 aa15.31■□□□□ 0.04
HDAC4-209ENST00000487617 LINC00322Q6ZN03 302 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-209ENST00000487617 CCDC190Q86UF4 302 aa15.31■□□□□ 0.04
HDAC4-209ENST00000487617 IL22RA2Q969J5 263 aa15.31■□□□□ 0.04
HDAC4-209ENST00000487617 ZNF414Q96IQ9 312 aa15.31■□□□□ 0.04
HDAC4-209ENST00000487617 STAB2Q8WWQ8 2551 aa15.31■□□□□ 0.04
HDAC4-209ENST00000487617 RBMY1BA6NDE4 496 aaKnown RBP15.3■□□□□ 0.04
HDAC4-209ENST00000487617 RBMY1EA6NEQ0 496 aaKnown RBP15.3■□□□□ 0.04
HDAC4-209ENST00000487617 RBMY1DP0C7P1 496 aaKnown RBP15.3■□□□□ 0.04
HDAC4-209ENST00000487617 SPAG8Q99932 426 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-209ENST00000487617 TENM3Q9P273 2699 aa15.3■□□□□ 0.04
HDAC4-209ENST00000487617 CEBPZOSA8MTT3 80 aa15.29■□□□□ 0.04
HDAC4-209ENST00000487617 TSPAN4O14817 238 aa15.29■□□□□ 0.04
HDAC4-209ENST00000487617 OPRK1P41145 380 aa15.29■□□□□ 0.04
HDAC4-209ENST00000487617 SUPT4H1P63272 117 aaKnown RBP15.29■□□□□ 0.04
HDAC4-209ENST00000487617 SPANXN2Q5MJ10 180 aa15.29■□□□□ 0.04
HDAC4-209ENST00000487617 CITED4Q96RK1 184 aa15.29■□□□□ 0.04
HDAC4-209ENST00000487617 HEYLQ9NQ87 328 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-209ENST00000487617 SMPXQ9UHP9 88 aa15.29■□□□□ 0.04
HDAC4-209ENST00000487617 IGHV7-4-1A0A0J9YVY3 117 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 C3orf84H3BNL1 204 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms