RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 H2BFWTQ7Z2G1 175 aa9.53□□□□□ -0.88
ABCF3-212ENST00000478288 TBC1D26Q86UD7 250 aa9.53□□□□□ -0.88
ABCF3-212ENST00000478288 OR4A16Q8NH70 328 aa9.53□□□□□ -0.88
ABCF3-212ENST00000478288 GPX8Q8TED1 209 aa9.53□□□□□ -0.88
ABCF3-212ENST00000478288 MISP3Q96FF7 219 aa9.53□□□□□ -0.88
ABCF3-212ENST00000478288 RARRES2Q99969 163 aa9.53□□□□□ -0.88
ABCF3-212ENST00000478288 VSIRQ9H7M9 311 aa9.53□□□□□ -0.88
ABCF3-212ENST00000478288 PKHD1P08F94 4074 aa9.53□□□□□ -0.88
ABCF3-212ENST00000478288 GNG7O60262 68 aa9.52□□□□□ -0.89
ABCF3-212ENST00000478288 IGKV1-39P01597 117 aa9.52□□□□□ -0.89
ABCF3-212ENST00000478288 IGKV1D-39P04432 117 aa9.52□□□□□ -0.89
ABCF3-212ENST00000478288 EIF4EP06730 217 aaKnown RBP9.52□□□□□ -0.89
ABCF3-212ENST00000478288 HLA-DMAP28067 261 aa9.52□□□□□ -0.89
ABCF3-212ENST00000478288 NPBWR1P48145 328 aa9.52□□□□□ -0.89
ABCF3-212ENST00000478288 TSPAN5P62079 268 aa9.52□□□□□ -0.89
ABCF3-212ENST00000478288 ERHP84090 104 aaKnown RBP9.52□□□□□ -0.89
ABCF3-212ENST00000478288 RPP25LQ8N5L8 163 aaKnown RBP9.52□□□□□ -0.89
ABCF3-212ENST00000478288 C11orf45Q8TAV5 145 aa9.52□□□□□ -0.89
ABCF3-212ENST00000478288 APOA1P02647 267 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 RCVRNP35243 200 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 TGFBR1P36897 503 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 RBMS2Q15434 407 aaKnown RBP9.51□□□□□ -0.89
ABCF3-212ENST00000478288 ZNF124Q15973 351 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 TMEM41BQ5BJD5 291 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 PVRIGQ6DKI7 326 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 TOMM20LQ6UXN7 152 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 ZNF600Q6ZNG1 722 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 DUSP18Q8NEJ0 188 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 OR11H2Q8NH07 326 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 MRGPRFQ96AM1 343 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 ZNF486Q96H40 463 aaPredicted RBP9.51□□□□□ -0.89
ABCF3-212ENST00000478288 TMEM231Q9H6L2 316 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 ZFAND3Q9H8U3 227 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
ABCF3-212ENST00000478288 IGHV3-49A0A0A0MS15 119 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 SMIM31A0A1B0GVY4 71 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 CORTO00230 105 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 IFNA4P05014 189 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 P0C879 139 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 TFPI2P48307 235 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 RND3P61587 244 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 ST8SIA2Q92186 375 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 YIPF6Q96EC8 236 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 MS4A6AQ9H2W1 248 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 HRH4Q9H3N8 390 aa9.5□□□□□ -0.89
ABCF3-212ENST00000478288 ST8SIA3O43173 380 aa9.49□□□□□ -0.89
ABCF3-212ENST00000478288 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
ABCF3-212ENST00000478288 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
ABCF3-212ENST00000478288 TMEM187Q14656 261 aa9.49□□□□□ -0.89
ABCF3-212ENST00000478288 GBGT1Q8N5D6 347 aa9.49□□□□□ -0.89
ABCF3-212ENST00000478288 C2CD4CQ8TF44 421 aa9.49□□□□□ -0.89
ABCF3-212ENST00000478288 PINX1Q96BK5 328 aaKnown RBP9.49□□□□□ -0.89
ABCF3-212ENST00000478288 PUS1Q9Y606 427 aaKnown RBP eCLIP9.49□□□□□ -0.89
ABCF3-212ENST00000478288 DNAH2Q9P225 4427 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 IGKV3-7A0A075B6H7 116 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 IGHV3OR16-13A0A075B7E8 117 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 IGHV3-74A0A0B4J1X5 117 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 A0A1W2PS18 150 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 C11orf94C9JXX5 98 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 DNASE2O00115 360 aaPredicted RBP9.48□□□□□ -0.89
ABCF3-212ENST00000478288 DEDDO75618 318 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 ATG12O94817 140 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 IGHV3-48P01763 117 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 SNCAP37840 140 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 SUB1P53999 127 aaKnown RBP eCLIP9.48□□□□□ -0.89
ABCF3-212ENST00000478288 LHFPL1Q86WI0 220 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 LILRB2Q8N423 598 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 GRAMD2BQ96HH9 432 aa9.48□□□□□ -0.89
ABCF3-212ENST00000478288 A0A0B4J293 547 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 TMEM50AO95807 157 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 IGKV1-5P01602 117 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 APOHP02749 345 aaPredicted RBP9.47□□□□□ -0.89
ABCF3-212ENST00000478288 TBPP20226 339 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 RPL5P46777 297 aaKnown RBP9.47□□□□□ -0.89
ABCF3-212ENST00000478288 DEFB131AP59861 70 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 ARRDC1Q8N5I2 433 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 SLC35G3Q8N808 338 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 Q8NAQ8 132 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 COMMD3Q9UBI1 195 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 FBXL17Q9UF56 701 aa9.47□□□□□ -0.89
ABCF3-212ENST00000478288 PCLOQ9Y6V0 5065 aa9.46□□□□□ -0.89
ABCF3-212ENST00000478288 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.89
ABCF3-212ENST00000478288 KIAA1109Q2LD37 5005 aa9.46□□□□□ -0.89
ABCF3-212ENST00000478288 A0A1B0GU03 582 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 CLN5O75503 358 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 B3GALNT1O75752 331 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 RNASE2P10153 161 aaKnown RBP9.46□□□□□ -0.9
ABCF3-212ENST00000478288 SPP1P10451 314 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 NPPCP23582 126 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 CRYBB3P26998 211 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 AKR1C2P52895 323 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 PIGPP57054 158 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 LSM3P62310 102 aaKnown RBP9.46□□□□□ -0.9
ABCF3-212ENST00000478288 BSXQ3C1V8 233 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 LEMD1Q68G75 181 aa9.46□□□□□ -0.9
ABCF3-212ENST00000478288 MORN3Q6PF18 240 aaPredicted RBP9.46□□□□□ -0.9
ABCF3-212ENST00000478288 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.9
ABCF3-212ENST00000478288 SNX29P2Q8IUI4 249 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms