RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 CTSDP07339 412 aaPredicted RBP0.62□□□□□ -2.31
MDM2-216ENST00000471946 TCL1AP56279 114 aa0.62□□□□□ -2.31
MDM2-216ENST00000471946 SPANXN3Q5MJ09 141 aa0.62□□□□□ -2.31
MDM2-216ENST00000471946 LPCAT4Q643R3 524 aa0.62□□□□□ -2.31
MDM2-216ENST00000471946 IQCF2Q8IXL9 164 aa0.62□□□□□ -2.31
MDM2-216ENST00000471946 OR4D11Q8NGI4 311 aa0.62□□□□□ -2.31
MDM2-216ENST00000471946 OPTNQ96CV9 577 aa0.62□□□□□ -2.31
MDM2-216ENST00000471946 NKIRAS1Q9NYS0 192 aa0.62□□□□□ -2.31
MDM2-216ENST00000471946 MAP3K5Q99683 1374 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 TRAV1-1A0A0B4J248 108 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 C2orf70A6NJV1 201 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 TPM3P06753 285 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 HTR1AP08908 422 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 ASAH2BP0C7U1 165 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 CASQ1P31415 396 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 IFITM2Q01629 132 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 PMAIP1Q13794 54 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 RPL22L1Q6P5R6 122 aaKnown RBP0.61□□□□□ -2.31
MDM2-216ENST00000471946 Q6ZQT0 140 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 DEFB128Q7Z7B8 93 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 BPIFA4PQ86YQ2 179 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 CLVS1Q8IUQ0 354 aaPredicted RBP0.61□□□□□ -2.31
MDM2-216ENST00000471946 LINC00471Q8N535 108 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 PLXNA4Q9HCM2 1894 aa0.61□□□□□ -2.31
MDM2-216ENST00000471946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.6□□□□□ -2.31
MDM2-216ENST00000471946 EEF1E1-BLOC1S5C9J1V9 151 aa0.6□□□□□ -2.31
MDM2-216ENST00000471946 TPM4P67936 248 aa0.6□□□□□ -2.31
MDM2-216ENST00000471946 C1orf158Q8N1D5 194 aa0.6□□□□□ -2.31
MDM2-216ENST00000471946 LRRC25Q8N386 305 aaPredicted RBP0.6□□□□□ -2.31
MDM2-216ENST00000471946 SLC35B4Q969S0 331 aa0.6□□□□□ -2.31
MDM2-216ENST00000471946 IMP4Q96G21 291 aaKnown RBP0.6□□□□□ -2.31
MDM2-216ENST00000471946 GINS4Q9BRT9 223 aa0.6□□□□□ -2.31
MDM2-216ENST00000471946 DOCK3Q8IZD9 2030 aa0.6□□□□□ -2.31
MDM2-216ENST00000471946 SCN10AQ9Y5Y9 1956 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 LOC110117498A0A087WWA1 95 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 CETN3O15182 167 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 OR1I1O60431 355 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 ISG15P05161 165 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 ZNF93P35789 620 aaPredicted RBP0.59□□□□□ -2.31
MDM2-216ENST00000471946 HBA1P69905 142 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 KHDC3LQ587J8 217 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 MIR17HGQ75NE6 70 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 LINC00311Q8N616 119 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 TMEM86BQ8N661 226 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 DNAJC9Q8WXX5 260 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 PTH2Q96A98 100 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 KLK9Q9UKQ9 250 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 ZFP30Q9Y2G7 519 aa0.59□□□□□ -2.31
MDM2-216ENST00000471946 LSM5Q9Y4Y9 91 aaKnown RBP0.59□□□□□ -2.31
MDM2-216ENST00000471946 ALPK3Q96L96 1907 aa0.58□□□□□ -2.32
MDM2-216ENST00000471946 CALB1P05937 261 aa0.58□□□□□ -2.32
MDM2-216ENST00000471946 OR5G3P0C626 314 aa0.58□□□□□ -2.32
MDM2-216ENST00000471946 SPANXN5Q5MJ07 72 aa0.58□□□□□ -2.32
MDM2-216ENST00000471946 OR4E2Q8NGC2 313 aa0.58□□□□□ -2.32
MDM2-216ENST00000471946 OR13C4Q8NGS5 318 aa0.58□□□□□ -2.32
MDM2-216ENST00000471946 TERB2Q8NHR7 220 aa0.58□□□□□ -2.32
MDM2-216ENST00000471946 C11orf68Q9H3H3 251 aaKnown RBP0.58□□□□□ -2.32
MDM2-216ENST00000471946 FBXL12Q9NXK8 326 aa0.58□□□□□ -2.32
MDM2-216ENST00000471946 MYH10P35580 1976 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 WRNQ14191 1432 aaPredicted RBP eCLIP0.57□□□□□ -2.32
MDM2-216ENST00000471946 DPRXA6NFQ7 191 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 TGOLN2O43493 480 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 OR2T1O43869 369 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 HYPMO75409 117 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 HLA-DRB1P01911 266 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 SSR2P43308 183 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 SNRPD2P62316 118 aaKnown RBP0.57□□□□□ -2.32
MDM2-216ENST00000471946 PDE6HQ13956 83 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 COTL1Q14019 142 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 CDKL4Q5MAI5 379 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 HIST2H3PS2Q5TEC6 136 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 PHF13Q86YI8 300 aaPredicted RBP0.57□□□□□ -2.32
MDM2-216ENST00000471946 SIGLECL1Q8N7X8 197 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 OR5A1Q8NGJ0 315 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 ZNF418Q8TF45 676 aaPredicted RBP0.57□□□□□ -2.32
MDM2-216ENST00000471946 TMEM147Q9BVK8 224 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 MTUS2Q5JR59 1369 aa0.57□□□□□ -2.32
MDM2-216ENST00000471946 TGIF2-C20orf24A0A0A6YYL0 155 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 BUB1B-PAK6H3BSN5 160 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 PSMD12O00232 456 aaPredicted RBP0.56□□□□□ -2.32
MDM2-216ENST00000471946 DCTN3O75935 186 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 TNNC2P02585 160 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 COX6A1P12074 109 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 MIFP14174 115 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 SPCS3P61009 180 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 RAB4BP61018 213 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 C8orf74Q6P047 294 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 LPCAT3Q6P1A2 487 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 OOSP2Q86WS3 158 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 H1FXQ92522 213 aaKnown RBP0.56□□□□□ -2.32
MDM2-216ENST00000471946 ULBP3Q9BZM4 244 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 PRTFDC1Q9NRG1 225 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 ERGIC3Q9Y282 383 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 PKIGQ9Y2B9 76 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 KIF1BO60333 1816 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 OBSL1O75147 1896 aa0.56□□□□□ -2.32
MDM2-216ENST00000471946 ADGRB2O60241 1585 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 KCNK1O00180 336 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 RPL5P46777 297 aaKnown RBP0.55□□□□□ -2.32
MDM2-216ENST00000471946 DEFA1P59665 94 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms