RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TAS2R30P59541 319 aa12.38□□□□□ -0.43
GPC1-207ENST00000466624 POLR2GP62487 172 aaKnown RBP eCLIP12.38□□□□□ -0.43
GPC1-207ENST00000466624 RPP30P78346 268 aaKnown RBP12.38□□□□□ -0.43
GPC1-207ENST00000466624 DEFA5Q01523 94 aa12.38□□□□□ -0.43
GPC1-207ENST00000466624 EXOSC2Q13868 293 aaKnown RBP12.38□□□□□ -0.43
GPC1-207ENST00000466624 C18orf65Q6ZTR6 163 aa12.38□□□□□ -0.43
GPC1-207ENST00000466624 C8orf86Q6ZUL3 223 aa12.38□□□□□ -0.43
GPC1-207ENST00000466624 RNASEH2CQ8TDP1 164 aaKnown RBP12.38□□□□□ -0.43
GPC1-207ENST00000466624 EEF1AKMT3Q96AZ1 226 aa12.38□□□□□ -0.43
GPC1-207ENST00000466624 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
GPC1-207ENST00000466624 MED28Q9H204 178 aa12.38□□□□□ -0.43
GPC1-207ENST00000466624 MGAT4CQ9UBM8 478 aa12.38□□□□□ -0.43
GPC1-207ENST00000466624 DNHD1Q96M86 4753 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 TRBV7-1A0A0A6YYK4 115 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 I3L2K1 104 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 K7EIM0 57 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 SIX6O95475 246 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 SCGB1D2O95969 90 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 IFNA10P01566 189 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 IGHV3-11P01762 117 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 IAPPP10997 89 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 H2BFSP57053 126 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 TMEM170AQ8WVE7 144 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 SMIM8Q96KF7 97 aa12.37□□□□□ -0.43
GPC1-207ENST00000466624 RCL1Q9Y2P8 373 aaKnown RBP12.37□□□□□ -0.43
GPC1-207ENST00000466624 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.36□□□□□ -0.43
GPC1-207ENST00000466624 MFSD2BA6NFX1 497 aa12.36□□□□□ -0.43
GPC1-207ENST00000466624 K7EPK0 472 aa12.36□□□□□ -0.43
GPC1-207ENST00000466624 SSSCA1O60232 199 aa12.36□□□□□ -0.43
GPC1-207ENST00000466624 FCGR2BP31994 310 aaPredicted RBP12.36□□□□□ -0.43
GPC1-207ENST00000466624 MYCNOSP40205 109 aa12.36□□□□□ -0.43
GPC1-207ENST00000466624 RRAS2P62070 204 aaPredicted RBP12.36□□□□□ -0.43
GPC1-207ENST00000466624 FHL3Q13643 280 aa12.36□□□□□ -0.43
GPC1-207ENST00000466624 C11orf87Q6NUJ2 197 aa12.36□□□□□ -0.43
GPC1-207ENST00000466624 ZNF502Q8TBZ5 544 aa12.36□□□□□ -0.43
GPC1-207ENST00000466624 MISP3Q96FF7 219 aa12.36□□□□□ -0.43
GPC1-207ENST00000466624 RANGRFQ9HD47 186 aaPredicted RBP12.36□□□□□ -0.43
GPC1-207ENST00000466624 PEF1Q9UBV8 284 aaKnown RBP12.36□□□□□ -0.43
GPC1-207ENST00000466624 C15orf62A8K5M9 175 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 TSC22D2O75157 780 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 MT-CO2P00403 227 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 HSPB1P04792 205 aaKnown RBP12.35□□□□□ -0.43
GPC1-207ENST00000466624 RAB11AP62491 216 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 RAB32Q13637 225 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 FCN2Q15485 313 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 ETV3LQ6ZN32 361 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 OR11H1Q8NG94 326 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 SCARB1Q8WTV0 552 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 ASB13Q8WXK3 278 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 RAX2Q96IS3 184 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 CCDC140Q96MF4 163 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 OR5B12Q96R08 314 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 TXN2Q99757 166 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 C21orf62Q9NYP8 219 aa12.35□□□□□ -0.43
GPC1-207ENST00000466624 RPS10-NUDT3A0A1W2PQS6 291 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 LINC01619G3V211 115 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 CCL24O00175 119 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 TMEM50AO95807 157 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 TSPAN15O95858 294 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 CXCL3P19876 107 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 PVALBP20472 110 aaPredicted RBP12.34□□□□□ -0.43
GPC1-207ENST00000466624 PAX9P55771 341 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 ZNF616Q08AN1 781 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 ETFRF1Q6IPR1 90 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 OR11H7Q8NGC8 314 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 OR1N2Q8NGR9 330 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 PINX1Q96BK5 328 aaKnown RBP12.34□□□□□ -0.43
GPC1-207ENST00000466624 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 GAR1Q9NY12 217 aaKnown RBP12.34□□□□□ -0.43
GPC1-207ENST00000466624 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
GPC1-207ENST00000466624 STRAPQ9Y3F4 350 aaKnown RBP12.34□□□□□ -0.43
GPC1-207ENST00000466624 LSM5Q9Y4Y9 91 aaKnown RBP12.34□□□□□ -0.43
GPC1-207ENST00000466624 IGHV4OR15-8A0A075B7B6 117 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 A0A087WW49 117 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 L7N2F9 121 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 PF4P02776 101 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 OR8U8P0C7N1 319 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 OPRK1P41145 380 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 MFAP4P55083 255 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 S100A10P60903 97 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 VAMP2P63027 116 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 DEFB136Q30KP8 78 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 SPANXN5Q5MJ07 72 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 PRR31Q5SQ13 230 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 Q6ZNX1 250 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 OR4C12Q96R67 309 aa12.33□□□□□ -0.44
GPC1-207ENST00000466624 FNDC4Q9H6D8 234 aaPredicted RBP12.33□□□□□ -0.44
GPC1-207ENST00000466624 WNK1Q9H4A3 2382 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 ANKRD34BA5PLL1 514 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 DEDDO75618 318 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 RLN2P04090 185 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 IFNA4P05014 189 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 PET100P0DJ07 73 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 SLC25A4P12235 298 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 ZP3P21754 424 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 CD69Q07108 199 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 CLEC19AQ6UXS0 136 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 PPP1R1CQ8WVI7 109 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 CACNG8Q8WXS5 425 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms