RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RFNGQ9Y644 331 aa13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 DNAJC9-AS1A6NH13 148 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 RRHO14718 337 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 AGPAT2O15120 278 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 NBR2O15453 112 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 SLC25A17O43808 307 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 NDUFA3O95167 84 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 SAA1P0DJI8 122 aaPredicted RBP13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 HILS1P60008 231 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 RAB2AP61019 212 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 DEFA5Q01523 94 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 SPSB3Q6PJ21 355 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 SUN5Q8TC36 379 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 FBXL15Q9H469 300 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 TMEM231Q9H6L2 316 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 BET1LQ9NYM9 111 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 ZNF257Q9Y2Q1 563 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 FBXO7Q9Y3I1 522 aa13.44□□□□□ -0.26
EXOSC3-203ENST00000465229 TRAV3A0A0B4J244 114 aa13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 CRYGBP07316 175 aa13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 MDKP21741 143 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 Q8N9W7 124 aa13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 RSG1Q9BU20 258 aa13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 HEYLQ9NQ87 328 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 FKBP11Q9NYL4 201 aa13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 C1RLQ9NZP8 487 aa13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 KIAA1456Q9P272 454 aa13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 METTL1Q9UBP6 276 aaKnown RBP13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 PLXNB1O43157 2135 aa13.43□□□□□ -0.26
EXOSC3-203ENST00000465229 UBE2L5PA0A1B0GUS4 154 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 CLDN34H7C241 214 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 UPK2O00526 184 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 SOX15O60248 233 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 AMY1AP04745 511 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 SFTA3P0C7M3 94 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 C5orf64Q2M2E5 130 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 VMA21Q3ZAQ7 101 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 TEX45Q8NA69 505 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 MBD3L1Q8WWY6 194 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 NKX6-2Q9C056 277 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 TPSG1Q9NRR2 321 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 SIGLEC9Q9Y336 463 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 MOB4Q9Y3A3 225 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 TET2Q6N021 2002 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 ATP5IP56385 69 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 MRGPRG-AS1Q2M3A8 158 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 TMEM41BQ5BJD5 291 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 C16orf82Q7Z2V1 217 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 C5orf56Q8N8D9 126 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 RPRMQ9NS64 109 aa13.42□□□□□ -0.26
EXOSC3-203ENST00000465229 FCN1O00602 326 aa13.41□□□□□ -0.26
EXOSC3-203ENST00000465229 SNAPINO95295 136 aa13.41□□□□□ -0.26
EXOSC3-203ENST00000465229 MBP02144 154 aa13.41□□□□□ -0.26
EXOSC3-203ENST00000465229 RAB11AP62491 216 aa13.41□□□□□ -0.26
EXOSC3-203ENST00000465229 SPINK9Q5DT21 86 aa13.41□□□□□ -0.26
EXOSC3-203ENST00000465229 ATRAIDQ6UW56 229 aa13.41□□□□□ -0.26
EXOSC3-203ENST00000465229 VSTM2AQ8TAG5 236 aa13.41□□□□□ -0.26
EXOSC3-203ENST00000465229 EIF5A2Q9GZV4 153 aaKnown RBP13.41□□□□□ -0.26
EXOSC3-203ENST00000465229 C9JQL5 133 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 MPDU1O75352 247 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 KBTBD11O94819 623 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 IFNA10P01566 189 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 HOXA1P49639 335 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 BTN1A1Q13410 526 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 PMS2P11Q13670 270 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 PLGLAQ15195 96 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 GUCA2BQ16661 112 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 PPP1R27Q86WC6 154 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 OR4A5Q8NH83 315 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 TMEM167AQ8TBQ9 72 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 OR51B2Q9Y5P1 312 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 C2CD3Q4AC94 2353 aa13.4□□□□□ -0.26
EXOSC3-203ENST00000465229 PRSS46E5RG02 174 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 M0QZK8 103 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 BLCAPP62952 87 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 DLK1P80370 383 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 PRCDQ00LT1 54 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 PRSS8Q16651 343 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 OR5B3Q8NH48 314 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 SFT2D1Q8WV19 159 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 RASL11BQ9BPW5 248 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 SLC35B3Q9H1N7 401 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 ZNF430Q9H8G1 570 aaPredicted RBP13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 ENY2Q9NPA8 101 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 RBFOX3A6NFN3 312 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 SH2D7A6NKC9 451 aaPredicted RBP13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 C17orf112F2Z3M2 114 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 TCF21O43680 179 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 RNASE1P07998 156 aaKnown RBP13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 FGF7P21781 194 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 ETV3LQ6ZN32 361 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 WDR83OSQ9Y284 106 aa13.39□□□□□ -0.27
EXOSC3-203ENST00000465229 FAM181BA6NEQ2 426 aa13.38□□□□□ -0.27
EXOSC3-203ENST00000465229 FNDC10F2Z333 226 aa13.38□□□□□ -0.27
EXOSC3-203ENST00000465229 INS-IGF2F8WCM5 200 aa13.38□□□□□ -0.27
EXOSC3-203ENST00000465229 HLA-DRB1P01911 266 aa13.38□□□□□ -0.27
EXOSC3-203ENST00000465229 CCL20P78556 96 aa13.38□□□□□ -0.27
EXOSC3-203ENST00000465229 ZNF709Q8N972 641 aa13.38□□□□□ -0.27
EXOSC3-203ENST00000465229 NPCDR1Q9BY65 106 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1741.8 ms