RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 YIF1AO95070 293 aa12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 IFNA17P01571 189 aa12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 CTSDP07339 412 aaPredicted RBP12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 IL18Q14116 193 aa12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 SLC35G3Q8N808 338 aa12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 SMIM4Q8WVI0 70 aa12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 DIRAS2Q96HU8 199 aa12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 SPAG8Q99932 426 aaPredicted RBP12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 TENM2Q9NT68 2774 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 C15orf62A8K5M9 175 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 K7EMT4 169 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 TSPAN4O14817 238 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 UCP1P25874 307 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 ETV6P41212 452 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 TMBIM6P55061 237 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 MRPS10P82664 201 aaKnown RBP12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 SSBP1Q04837 148 aaKnown RBP12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 RELQ04864 619 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 MEF2DQ14814 521 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 OR4C16Q8NGL9 310 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 RNASE11Q8TAA1 199 aaKnown RBP12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 RTBDNQ9BSG5 229 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 GGTLC1Q9BX51 225 aa12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 CCDC59Q9P031 241 aaKnown RBP12.26□□□□□ -0.45
NCKIPSD-208ENST00000454134 LOC102724200A0A096LPH7 203 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 GNG7O60262 68 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 ATG12O94817 140 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 OR5AC1P0C628 307 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 SNCAP37840 140 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 LAMTOR1Q6IAA8 161 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 Q6ZRM9 215 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 RRNAD1Q96FB5 475 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 TXN2Q99757 166 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 PDCD10Q9BUL8 212 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 C6orf62Q9GZU0 229 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 NXF2Q9GZY0 626 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 SMPXQ9UHP9 88 aa12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 C14orf166Q9Y224 244 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-208ENST00000454134 TEX13DA0A0J9YY54 714 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 CTDSPLO15194 276 aa12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 AKAIN1P0CW23 69 aa12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 FCGR2BP31994 310 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 HOXA1P49639 335 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 LHFPL5Q8TAF8 219 aa12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 RNF2Q99496 336 aa12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 RHPN1-AS1Q9BWJ2 59 aa12.24□□□□□ -0.45
NCKIPSD-208ENST00000454134 IGHV3OR16-13A0A075B7E8 117 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 IGHV3-74A0A0B4J1X5 117 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 IGHV7-4-1A0A0J9YVY3 117 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 H3BMQ9 156 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 CHEK1O14757 476 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 RNASE2P10153 161 aaKnown RBP12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 ODF3L2Q3SX64 289 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 TMEM116Q8NCL8 245 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 GLYATL2Q8WU03 294 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 OR10C1Q96KK4 312 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 BCL7BQ9BQE9 202 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 SLIRPQ9GZT3 109 aaKnown RBP12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 TMEM222Q9H0R3 208 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 NAA60Q9H7X0 242 aa12.23□□□□□ -0.45
NCKIPSD-208ENST00000454134 IGKV3-7A0A075B6H7 116 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 INS-IGF2F8WCM5 200 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 NOL3O60936 208 aaKnown RBP12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 B3GALNT1O75752 331 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 CDS2O95674 445 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 RPL5P46777 297 aaKnown RBP12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 TFPI2P48307 235 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 MLANAQ16655 118 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 TOMM20LQ6UXN7 152 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 DUSP18Q8NEJ0 188 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 MRPL36Q9P0J6 103 aaKnown RBP12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 GPR132Q9UNW8 380 aa12.22□□□□□ -0.45
NCKIPSD-208ENST00000454134 CSMD3Q7Z407 3707 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 TRAV14DV4A0A0A6YYC5 116 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 LCE6AA0A183 80 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 ANKRD20A5PA0PJZ0 165 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 OR4C46A6NHA9 309 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 GSTZ1O43708 216 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 TNFSF8P32971 234 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 NPBWR1P48145 328 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 SUB1P53999 127 aaKnown RBP eCLIP12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 SURF2Q15527 256 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 PVRIGQ6DKI7 326 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 RBPMSQ93062 196 aaKnown RBP12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 OVOL2Q9BRP0 275 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 FNDC4Q9H6D8 234 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 PRR13Q9NZ81 148 aa12.21□□□□□ -0.45
NCKIPSD-208ENST00000454134 TMEM50AO95807 157 aa12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 APOHP02749 345 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 TMEM268Q5VZI3 342 aa12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 APRG1Q8IVJ8 170 aa12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 GBGT1Q8N5D6 347 aa12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 MCFD2Q8NI22 146 aa12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 GPR146Q96CH1 333 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms