RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 TMEM268Q5VZI3 342 aa12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 C11orf87Q6NUJ2 197 aa12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 SPSB3Q6PJ21 355 aa12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 BSCL2Q96G97 398 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 SLC25A21Q9BQT8 299 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 PLEKHA3Q9HB20 300 aa12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
SCAMP4-205ENST00000452128 OR2T8A6NH00 312 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 MT-CO2P00403 227 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 NHLRC4P0CG21 123 aaPredicted RBP12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 FAUP35544 74 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 ELLP55199 621 aaPredicted RBP12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 ERHP84090 104 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 PLET1Q6UQ28 207 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 SLC35G3Q8N808 338 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 TMEM170AQ8WVE7 144 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 CACNG8Q8WXS5 425 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 TMEM190Q8WZ59 177 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 TXN2Q99757 166 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 TECRQ9NZ01 308 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 CACNG5Q9UF02 275 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 MLXQ9UH92 298 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 TENM3Q9P273 2699 aa12.14□□□□□ -0.47
SCAMP4-205ENST00000452128 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 IGHV3-35A0A0C4DH35 117 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 A6NHS1 94 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 IFNA17P01571 189 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 AKR1C4P17516 323 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 CD69Q07108 199 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 LCN12Q6JVE5 192 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 LYZL2Q7Z4W2 148 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 LRTM2Q8N967 370 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 UXS1Q8NBZ7 420 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 FNDC4Q9H6D8 234 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 MRPL36Q9P0J6 103 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
SCAMP4-205ENST00000452128 NDUFA4O00483 81 aa12.12□□□□□ -0.47
SCAMP4-205ENST00000452128 PITX3O75364 302 aa12.12□□□□□ -0.47
SCAMP4-205ENST00000452128 BTCP35070 178 aa12.12□□□□□ -0.47
SCAMP4-205ENST00000452128 MLANAQ16655 118 aa12.12□□□□□ -0.47
SCAMP4-205ENST00000452128 ANKRD55Q3KP44 614 aa12.12□□□□□ -0.47
SCAMP4-205ENST00000452128 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-205ENST00000452128 SBSPONQ8IVN8 264 aa12.12□□□□□ -0.47
SCAMP4-205ENST00000452128 MISP3Q96FF7 219 aa12.12□□□□□ -0.47
SCAMP4-205ENST00000452128 ZNF320A2RRD8 509 aa12.11□□□□□ -0.47
SCAMP4-205ENST00000452128 K7EMT4 169 aa12.11□□□□□ -0.47
SCAMP4-205ENST00000452128 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
SCAMP4-205ENST00000452128 FRMD6-AS1P0C7T7 363 aa12.11□□□□□ -0.47
SCAMP4-205ENST00000452128 IGHV4-30-4P0DP06 118 aa12.11□□□□□ -0.47
SCAMP4-205ENST00000452128 MFAP4P55083 255 aa12.11□□□□□ -0.47
SCAMP4-205ENST00000452128 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
SCAMP4-205ENST00000452128 MRPL27Q9P0M9 148 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-205ENST00000452128 PLA2G10O15496 165 aa12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 CCR6P51684 374 aa12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 TMEM61Q8N0U2 210 aa12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 LGI3Q8N145 548 aa12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 OR10C1Q96KK4 312 aa12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 ASCL2Q99929 193 aa12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 GAR1Q9NY12 217 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 HSPB7Q9UBY9 170 aa12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
SCAMP4-205ENST00000452128 NAP1L6A6NFF2 107 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 NDUFB6O95139 128 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 SFT2D2O95562 160 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 TMEM50AO95807 157 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 SULT1A3P0DMM9 295 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 SULT1A4P0DMN0 295 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 IL7P13232 177 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 SNCAP37840 140 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 SRPXP78539 464 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 PPP1R1AQ13522 171 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 C2orf83Q53S99 150 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 ZNF57Q68EA5 555 aaPredicted RBP12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 LINC00299Q6ZSB3 139 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 WDR89Q96FK6 387 aaPredicted RBP12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 PALMDQ9NP74 551 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 NBEAL2Q6ZNJ1 2754 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 DNAH7Q8WXX0 4024 aa12.09□□□□□ -0.47
SCAMP4-205ENST00000452128 TRAV25A0A0B4J276 109 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 A0A1B0GU03 582 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 DUXBA0A1W2PPF3 345 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 C15orf62A8K5M9 175 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 CD7P09564 240 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 SLC25A6P12236 298 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 HTR2BP41595 481 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 TNFRSF9Q07011 255 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 SMCO1Q147U7 214 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 RBMS2Q15434 407 aaKnown RBP12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 Q56UQ5 140 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 TMED4Q7Z7H5 227 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 RNASE11Q8TAA1 199 aaKnown RBP12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 DAZ1Q9NQZ3 744 aaKnown RBP12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 CACFD1Q9UGQ2 172 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
SCAMP4-205ENST00000452128 CORTO00230 105 aa12.07□□□□□ -0.48
SCAMP4-205ENST00000452128 IGKV1-17P01599 117 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms