RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 TMEM268Q5VZI3 342 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 SPSB3Q6PJ21 355 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 GTSCR1Q86UQ5 136 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 FAM219AQ8IW50 185 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 TOMM5Q8N4H5 51 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 SLC35G3Q8N808 338 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 PALMDQ9NP74 551 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 PRR13Q9NZ81 148 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 MLXQ9UH92 298 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 KCNIP3Q9Y2W7 256 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 TMEM56-RWDD3S4R434 201 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 MT-CO2P00403 227 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 AKR1C4P17516 323 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 FAUP35544 74 aaKnown RBP9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 SNCAP37840 140 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 MFAP4P55083 255 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 ELLP55199 621 aaPredicted RBP9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 AP3S2P59780 193 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 SUPT4H1P63272 117 aaKnown RBP9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 TMEM187Q14656 261 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 GUCA2BQ16661 112 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 PINX1Q96BK5 328 aaKnown RBP9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 GPR146Q96CH1 333 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 WDR89Q96FK6 387 aaPredicted RBP9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 GALNT14Q96FL9 552 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 ZNF414Q96IQ9 312 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 TXN2Q99757 166 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 PDCD10Q9BUL8 212 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 MRPL27Q9P0M9 148 aaKnown RBP9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 UFC1Q9Y3C8 167 aa9.6□□□□□ -0.87
PRPF40A-203ENST00000448428 NDUFA4O00483 81 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 RNASE2P10153 161 aaKnown RBP9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 FCGR2BP31994 310 aaPredicted RBP9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 SPCS3P61009 180 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 SPANXN2Q5MJ10 180 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 ZNF57Q68EA5 555 aaPredicted RBP9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 PVRIGQ6DKI7 326 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 TMEM61Q8N0U2 210 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 TMEM190Q8WZ59 177 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 MARC2Q969Z3 335 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 GAR1Q9NY12 217 aaKnown RBP9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 CACNG5Q9UF02 275 aa9.59□□□□□ -0.87
PRPF40A-203ENST00000448428 IGHV3OR16-8A0A075B7F1 116 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 CD7P09564 240 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 HOXA1P49639 335 aaPredicted RBP9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 SUB1P53999 127 aaKnown RBP eCLIP9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 CD81P60033 236 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 BTNL8Q6UX41 500 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 IL22RA2Q969J5 263 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 WWC2-AS2Q96NR7 200 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 NEURL2Q9BR09 285 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 C20orf24Q9BUV8 137 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 SRRQ9GZT4 340 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 TUBA4BQ9H853 241 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 ENY2Q9NPA8 101 aa9.58□□□□□ -0.88
PRPF40A-203ENST00000448428 K7EMT4 169 aa9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 NUPL2O15504 423 aaKnown RBP9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 ZNF207O43670 478 aaKnown RBP9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 SCAF4O95104 1147 aaKnown RBP9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 BAK1Q16611 211 aa9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 MLANAQ16655 118 aa9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 BSXQ3C1V8 233 aa9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 LYZL2Q7Z4W2 148 aa9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 TMED4Q7Z7H5 227 aa9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 DEDD2Q8WXF8 326 aa9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 DAZ1Q9NQZ3 744 aaKnown RBP9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 NDUFA13Q9P0J0 144 aa9.57□□□□□ -0.88
PRPF40A-203ENST00000448428 DNAH9Q9NYC9 4486 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 TRAV25A0A0B4J276 109 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 A0A0B4J2A0 478 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 GNG7O60262 68 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 SULT1A3P0DMM9 295 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 SULT1A4P0DMN0 295 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 RELQ04864 619 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 TMEM128Q5BJH2 165 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 LGI3Q8N145 548 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 DEFB125Q8N687 156 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 DUSP18Q8NEJ0 188 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 RCHY1Q96PM5 261 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 SDHCQ99643 169 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 SLC25A21Q9BQT8 299 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 TM2D3Q9BRN9 247 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 FNDC4Q9H6D8 234 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 HEYLQ9NQ87 328 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 SHPKQ9UHJ6 478 aa9.56□□□□□ -0.88
PRPF40A-203ENST00000448428 C15orf62A8K5M9 175 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 CEBPZOSA8MTT3 80 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 OR11H12B2RN74 326 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 CORTO00230 105 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 YIF1AO95070 293 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 NXPH3O95157 252 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 TMEM50AO95807 157 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 ANXA3P12429 323 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 HTR2BP41595 481 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 NPBWR1P48145 328 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 CCR6P51684 374 aa9.55□□□□□ -0.88
PRPF40A-203ENST00000448428 HAGHQ16775 308 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms